Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g3397 ATGAAGAAGATGAAGATCAATATAATGCTGAGGAAGTGCAAGAGCTTGTCAAATTGGCAGCTAGGAAGATCTTCATCATATAGCAGTTTGAGGTCCAAATCTGTGAAGGAGAATTTGTGGGCTGGAAATGAGATGCAGGAACATGAAAATTTTGAAACTATATTTGTTGGCAGCACAAGGAAACGGTACGTAATCAGCTCCAAATATCTGAATCATCCTCTTATGAATGCTCTAATCAATAAGTCAAAGCGAAACGACGGTGATGATTATGAAAATGTTTTGGTGGTTAACTGTGAGGTAGTTCTCTTTGATCATCTCTTGTGGATGCTAGAAAAGGCAGATCCAATGCTCACTGCTGACTCTCTGGAAGAATTGGCTGACCTCTATGTCATTTAA 396 0.3914 MKKMKINIMLRKCKSLSNWQLGRSSSYSSLRSKSVKENLWAGNEMQEHENFETIFVGSTRKRYVISSKYLNHPLMNALINKSKRNDGDDYENVLVVNCEVVLFDHLLWMLEKADPMLTADSLEELADLYVI* 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g3397 131 Pfam Auxin responsive protein 31 110 IPR003676 GO:0009733
Ahy5g3397 131 PANTHER EXPRESSED PROTEIN 5 130 - -
Ahy5g3397 131 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 5 130 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g3397 Ahy-Chr5 115751954 115752751 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g3397 54 111 Calmodulin-binding Proteins AT3G43120 32.759 4.02e-08 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g3397 - - adu:107491473 248.44