Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g3392 ATGGAGGGTCCTGGTCCTCCTGCGAACGATATGTGCTCGGTGTGCCATGGGAACTTCAACACTCCGTGTCAATCCAACTGCTGTCACTGGTTCTGCGCCAACTGCATCATGCTCGTCTGGCACCACGGATCCGCCGTGCAGCCCTGCAAGTGCCCCCTCTGCCGCCGTCCTATCACTCTCCTCGTCCCCACCGACGACTCCCTCAGCCACCGCCATGACCCCGAGGTTGCTAACGCTCTTGACAAGATCCAGAGATACAATCGCTTGTTCGGTGAGCGTGAGGGCGGGCTTCTTCAGCGATTGCAAGATCTTCCATTCCTACTGCGTCGGCTTCTCCGGGACTTCTCCGATCCTCGCAGATCCCTTCCACTTGTCATTCGAGCTCGCGTCTACATTGCTATGATACTAAGTGTTGTGTACATCATCAGCCCTATAGACATCATTCCAGAAGGGATATTAGGAATAGTTGGACTCTTGGATGATCTGCTCATTGTGCTCATCTGTTTCCTGCACGTCGCTGCCCTTTATAGATCAGTACTCTATCTCCGCCACGGTGGTTCCTGA 564 0.5443 MEGPGPPANDMCSVCHGNFNTPCQSNCCHWFCANCIMLVWHHGSAVQPCKCPLCRRPITLLVPTDDSLSHRHDPEVANALDKIQRYNRLFGEREGGLLQRLQDLPFLLRRLLRDFSDPRRSLPLVIRARVYIAMILSVVYIISPIDIIPEGILGIVGLLDDLLIVLICFLHVAALYRSVLYLRHGGS* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g3392 187 Pfam Protein of unknown function (DUF1232) 132 166 IPR010652 -
Ahy5g3392 187 ProSiteProfiles Zinc finger RING-type profile. 12 55 IPR001841 -
Ahy5g3392 187 PANTHER UNCHARACTERIZED 7 187 IPR038896 GO:0061630
Ahy5g3392 187 SUPERFAMILY RING/U-box 10 62 - -
Ahy5g3392 187 ProSitePatterns Zinc finger RING-type signature. 27 36 IPR017907 -
Ahy5g3392 187 PANTHER BNAC07G13660D PROTEIN 7 187 - -
Ahy5g3392 187 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 5 103 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g3392 Ahy-Chr5 115693464 115694480 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g3392 37 187 C3H Transcription Factor Family AT1G72175 74.172 2.38e-66 198
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g3392 K15707 - jre:109000985 257.684