Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g3379 ATGGAAGCTTCTTCCAGTACATGTGAGATAGTGGAGTCCAGGGAAGATATCATTTCTGAGTTCAAAGTGGCTGAAAAACCTGAGTGTAGTTATGCCAACAAATCAGGGAAAAAGTATTCTATCGAGGATGATATTAATCGTCTTTTCCAGGGTATTGACATTAAAAGTTCATCTAGAGGTCTTGGTGCATCACGCTCACACAAGAGTGCTCTTAAGAGGCCAATAAAAGTTAGTTCAGCTCAGGCCTCAGGAATCGGCATCTCCGAACCTGTTAGTTTGAAGCAGGCATTTAGAGGCTTGTGCATTTCTCAGGCGTCGGAAATGGCTGCTTTGAAGAGACTCTCAAAGCCATGCAGTTCGTCACGAGTATCAGAGGCTGGCAACATCAAAAAGTTATACACAGCAGTTGTAGATGAGGGCAAACAGAACTTGCTGGAAATCTCCCTGGTGCCAGAGGCATCTGCCCATTCTGATAAATTGGCCAGGGTCTCAATATCCATATCAAATTCAAGTGCTAATCATTCTGTTCCCTTGGCTGATGCCACAAACCTGAAAGAAACTACAACCAGGCTTGCTTCTCGAGATCAGATTGTTCCTCTTCCATCAGAAGTTGAAGCTGAAAAACTGACACTTGCAAATTTTTCACCGACTGCTTGTGCAAATGAGATTATGCCGGAGGGCAGAATGGATCCTGCTGCTGCTCACAGTTTTTCAATGGCAGATAAGGGACACAAAGCAAATATACTTTGTGTGTCTTCTCCTTCCTGCTCTAGTACTGGTGATGGAGTGGATAAACCCACAAGCAGCCATACATGTTTAGCAAAGTCAATAGTCAGTAGCAAGAACTTCTTTAAGAAAAAAGTAAAGCAAGATGTTTGTTCTGCCTCAAGCAGCTCCACTCTGTGCCTGAGAAAAGTTGACAACAATTTGGGATCTATTGCAAATACTTTGGACAAAGAAACAGACAATTCTGATTTGAAGCATGAAACGAAAGGAAACCAAAAGCTGTCTCCCAGCAGTTCAAATGGTAGCATTGAAATTAACTCAATCAACTTTGGTAAGGACTCATGCAAACCTGGTTTCACGTTAAATTGCAACAGGAGAACCAAATTTCAAGTGACAAAAGTTGAAGAGAAATCAAGATCAAAGGAAAAGGGTGAGTTCTCCCAAAGCTCAAAAAGTAGCATTGGTGAGTATAGTAGTAGCACAAGCATCAGCGAGGAGAGCAATCTAAGTGGTTCCAGTCGCATTGGCTACAGGCCTCATATGTCAAAACATCTGAGATGGGAAGCTATTCGAGCTGTTCAGCAGCATGGTAATTTAAGTTTGAGGCACTTTAAGCTGCTAAGGAAGCTTGGTAGCGGGGATATTGGAACTGTTTATCTTGCAGAACTAATTGGGACAAACTGCCTTTTTGCCTTAAAGGTGATGGACAATGAATTCTTGGCAAGCCGGAAGAAAATGTTCAGGGCTCAAACTGAACGAGAGATCCTACAGATGCTGGATCATCCATTTTTTCCTACGCTATATTCCCATATCTCCACAGATAAGCTTTCTTGCTTGGTCATGGAGTATTGTCCAGGTGGTGATCTGCATGTATTACGGCAGAGGCAGCCATATCGGAGTTTCTTGGAACAAGCAGCTAGGTTTTATGTTGCTGAGGTTCTTCTTGCCTTGGAGTACTTGCACATGCTGGGAGTTGTATATCGAGATCTAAAGCCAGAAAATATCCTAGTGCGAGAAGATGGCCACATTATGCTGACAGATTTTGACTTGTCACTGAGATGTTCCGTGAACCCAATGCTAGTAAAATCATCTTCTCCGGAGGAGGTGGATGGAACAAGAAAAATGTCGAGTCCATGCTCAGATGCCAGCTGCATTCAGCCTTTCTGTCTCCAACCTGATTGGCAAGTCTCCTGCTTTACTCCCATTTTAATATCCGGTGGAGCGAAATCTCGAAAGACAAAGGCTGATGCTCAGGTTGGTCCACTGCCACAGCTCGTGGTGGAGCCTATTAGCGCTCGATCTAACTCCTTTGTTGGAACCTATGAATATCTTGCTCCGGAGATCATCAAAGGTGAGGGTCACGGGAGTGCCGTGGATTGGTGGACTTTCGGTATATTTTTGTTTGAGCTTTTGTATGGTAGGACTCCCTTCAAGGGCCAATCAAATGAGGATACGTTATCCAACGTTGTGTCGCAAAGCCTTAAGTTCCCAGGTGCTCCTATTGTCAGTTTCCATGCTAGAGATTTGATCAGAGGATTGTTGATAAAGGATCCTGAAACTCGGTTAGGTTCTGTCAAAGGAGCTGCTGAAATAAAGCAGCATCCCTTCTTTGAAGGACTGAACTGGGCTCTAATACGATGTGCAGCGCCACCAGAGCTCCCCAAATTTCGTGATTTCGGAAGTCGTGCTCCATCTATGGCTGCTCAGAAGGAGAATGCAAACGATTTAGAGGACACAGAAGATTGTGAGGAGTTTGAGTTGTTTTAG 2493 0.4388 MEASSSTCEIVESREDIISEFKVAEKPECSYANKSGKKYSIEDDINRLFQGIDIKSSSRGLGASRSHKSALKRPIKVSSAQASGIGISEPVSLKQAFRGLCISQASEMAALKRLSKPCSSSRVSEAGNIKKLYTAVVDEGKQNLLEISLVPEASAHSDKLARVSISISNSSANHSVPLADATNLKETTTRLASRDQIVPLPSEVEAEKLTLANFSPTACANEIMPEGRMDPAAAHSFSMADKGHKANILCVSSPSCSSTGDGVDKPTSSHTCLAKSIVSSKNFFKKKVKQDVCSASSSSTLCLRKVDNNLGSIANTLDKETDNSDLKHETKGNQKLSPSSSNGSIEINSINFGKDSCKPGFTLNCNRRTKFQVTKVEEKSRSKEKGEFSQSSKSSIGEYSSSTSISEESNLSGSSRIGYRPHMSKHLRWEAIRAVQQHGNLSLRHFKLLRKLGSGDIGTVYLAELIGTNCLFALKVMDNEFLASRKKMFRAQTEREILQMLDHPFFPTLYSHISTDKLSCLVMEYCPGGDLHVLRQRQPYRSFLEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLTDFDLSLRCSVNPMLVKSSSPEEVDGTRKMSSPCSDASCIQPFCLQPDWQVSCFTPILISGGAKSRKTKADAQVGPLPQLVVEPISARSNSFVGTYEYLAPEIIKGEGHGSAVDWWTFGIFLFELLYGRTPFKGQSNEDTLSNVVSQSLKFPGAPIVSFHARDLIRGLLIKDPETRLGSVKGAAEIKQHPFFEGLNWALIRCAAPPELPKFRDFGSRAPSMAAQKENANDLEDTEDCEEFELF* 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g3379 830 Gene3D Phosphorylase Kinase; domain 1 444 525 - -
Ahy5g3379 830 MobiDBLite consensus disorder prediction 389 417 - -
Ahy5g3379 830 MobiDBLite consensus disorder prediction 374 417 - -
Ahy5g3379 830 SUPERFAMILY Protein kinase-like (PK-like) 428 798 IPR011009 -
Ahy5g3379 830 SMART serkin_6 446 779 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy5g3379 830 ProSiteProfiles Protein kinase domain profile. 446 779 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy5g3379 830 Gene3D Transferase(Phosphotransferase) domain 1 526 595 - -
Ahy5g3379 830 Gene3D Transferase(Phosphotransferase) domain 1 674 797 - -
Ahy5g3379 830 PANTHER SERINE/THREONINE-PROTEIN KINASE D6PKL1 ISOFORM X1 1 830 - -
Ahy5g3379 830 MobiDBLite consensus disorder prediction 321 343 - -
Ahy5g3379 830 CDD STKc_phototropin_like 444 802 - -
Ahy5g3379 830 MobiDBLite consensus disorder prediction 374 388 - -
Ahy5g3379 830 Pfam Protein kinase domain 676 779 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy5g3379 830 Pfam Protein kinase domain 447 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy5g3379 830 ProSitePatterns Serine/Threonine protein kinases active-site signature. 567 579 IPR008271 GO:0004672|GO:0006468
Ahy5g3379 830 PANTHER FLIPPASE KINASE 1-RELATED 1 830 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g3379 Ahy-Chr5 115574178 115577982 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g3379 373 830 AGC Kinase Gene Family AT3G52890 66.808 0.0 640
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Ahy5g3379 Pkinase 2.30E-36 CL0016