Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g3363 ATGGCTGGGATTGATGAAAATGTTGGGGTCCCCGGGGATTGGAGTGGTCCTAGCCCGAGTCCCAGAACCTTTTTCTCTGTAATGTTAGGGGAGGATAATGTAGCAAGATCAATGTCAGACCCTCCTCCAGGTGGTGATGGAGCACAAGATGGTGATCAGAAGTTGGTGTCACGGGGTGGTCTTGTTGAGAGGATGGCAGCTAGAGCAGGGTTCAATGCACCCAGGTTGAACACTGACACCATTAGATCTACTGACCTTTCACTCAATTCTGATGTTCCTTCTCCATACTTGACCATACCACCTGGTCTCAGTCCTACCACCCTTTTAGATTCTCCGGTCTTCCTTACAAATTCACTGGCACAGCCATCTCCAACAACTGGAAAGTTTCCGTTCATCTCAAACGGCAACATATCATCCGATGCTCCTGAAAGATGCAAAGATAACAACTTTGATGATATTTATGCATCATCCTTTGCATTCAAGCCTACAACAGATTTAGGCTCCTCTTTTTATCAAGGCGCTGCCAGAAAAATGAATCCTACTACAATAGCTCAACAATCTCTTCCTGGTGTTGAGGTCCCTGTTCAGTCGGAACATTCTTTTCAATCGCGAAGTGCTGATGTAGTAAAATCTCAAACTCAGAATAAAAATGGCCTCCATCTTCAGCCAGACTTTATTGAGTCATCTCCTCAACAGGATACTGTCGGTGTTAGCCTTGAGCATTCGCCACAACTTGAAGAGCAAGCAGATGAAGAGGGAGAGCCAAGAGGGAATGGTGACTCAATGGCTGCTGGTTTTGGTGGTGCACCATCTGAAGATGGATATAATTGGAGAAAATATGGCCAGAAGCAAGTTAAGGGTAGCGAGTACCCACGAAGTTACTACAAGTGTACACATCCAAATTGTCCTGTGAAAATGAAAGTAGAACGATCTCATGAAGGCCACATAACAGAGATCATCTATAAGGGAGCACACAACCATCCTAAACCTCCTCCGAATCGCCGCTCAGGAATAGCTTCAGCCAACCCTCCAAGTGACATGCAAATGGACAATCCGGAGCATGTTGAACGACAAAGTGGCAGCGATGGAGAGCTGGGCTGGGCTAATTTACAGAAGGGGAATGTAGCCGGAGCTGCTAATTGGAAGAATGACAACCTTGAAGTGACATCATCAGCATCTGTTGCCCCCGAGTATTGTAACCAGTCTACCAATTCACAGGCTCAAAATGGTACTCAGTTTGACTCGGGAGATGCGGTGGATGCATCTTCTACTTTTTCTAATGAAGATGATGATGATGATCGAGGTACTCATGGTAGTGTATCATTAGGTTATGATGGGGAAGGAGATGAATCAGAATCTAAAAGAAGGAAACTGGAATCATATGCAACAGAGTTGAGTGGAGCTACTAGAGCTATTCGCGAACCTAGAGTTGTTGTACAAACTACCAGCGAAGTAGACATCCTTGACGATGGTTATCGGTGGAGGAAATATGGGCAGAAGGTTGTCAAAGGAAATCCCAACCCGAGGAGTTACTACAAGTGTACCAATGCAGGCTGCACTGTGAGGAAACACGTTGAGAGAGAATCACATGACCTTAAATCTGTAATCACCACATACGAGGGCAAGCACAACCATGATGTTCCTGCCGCACGCTCTAGCAGTCATGTCAATGCTAACGCTTCTGGCAGTGTTCCCGGGCAAGCACCTGGCGTTCTGCAACCCCATGTTCACAGACCTGAACCAACTCAAGTTCCCGGTGGCATTGGAAGGCTTGAGAGGCCTCCTGCCCTCGGTGCATTCAACCTACCGGGGAGGCAGCAGCTAGGACCTCCACATGGCTTCTCCTTTGGAACGAATCAACCTCTTCTGCCGAACTTGGCGATGCCTGGATTCGGCCCCGGGCAATCAAAGCTTCCTGTGATGCCAGTTCATCCATTCTTGGCAACGCAACAACAACGTCCTCCTAATGAGATGGGGTTCATGTTGCCCAAGGGTGAACCAAATGTAGAGCCTATTCCTGAGCGTCATAACCTGCCCAGTGGCTCATACCAAGATCTCATGAGTCGCATGCCCCTTGGACCTCACATGTGA 2091 0.4754 MAGIDENVGVPGDWSGPSPSPRTFFSVMLGEDNVARSMSDPPPGGDGAQDGDQKLVSRGGLVERMAARAGFNAPRLNTDTIRSTDLSLNSDVPSPYLTIPPGLSPTTLLDSPVFLTNSLAQPSPTTGKFPFISNGNISSDAPERCKDNNFDDIYASSFAFKPTTDLGSSFYQGAARKMNPTTIAQQSLPGVEVPVQSEHSFQSRSADVVKSQTQNKNGLHLQPDFIESSPQQDTVGVSLEHSPQLEEQADEEGEPRGNGDSMAAGFGGAPSEDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCPVKMKVERSHEGHITEIIYKGAHNHPKPPPNRRSGIASANPPSDMQMDNPEHVERQSGSDGELGWANLQKGNVAGAANWKNDNLEVTSSASVAPEYCNQSTNSQAQNGTQFDSGDAVDASSTFSNEDDDDDRGTHGSVSLGYDGEGDESESKRRKLESYATELSGATRAIREPRVVVQTTSEVDILDDGYRWRKYGQKVVKGNPNPRSYYKCTNAGCTVRKHVERESHDLKSVITTYEGKHNHDVPAARSSSHVNANASGSVPGQAPGVLQPHVHRPEPTQVPGGIGRLERPPALGAFNLPGRQQLGPPHGFSFGTNQPLLPNLAMPGFGPGQSKLPVMPVHPFLATQQQRPPNEMGFMLPKGEPNVEPIPERHNLPSGSYQDLMSRMPLGPHM* 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g3363 696 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 75 582 IPR044810 GO:0003700
Ahy5g3363 696 MobiDBLite consensus disorder prediction 1 57 - -
Ahy5g3363 696 PANTHER WRKY TRANSCRIPTION FACTOR SUSIBA2-LIKE ISOFORM X1 75 582 - -
Ahy5g3363 696 MobiDBLite consensus disorder prediction 187 241 - -
Ahy5g3363 696 ProSiteProfiles WRKY domain profile. 483 548 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy5g3363 696 ProSiteProfiles WRKY domain profile. 272 330 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy5g3363 696 MobiDBLite consensus disorder prediction 400 423 - -
Ahy5g3363 696 Pfam WRKY DNA -binding domain 489 545 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy5g3363 696 Pfam WRKY DNA -binding domain 272 328 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy5g3363 696 MobiDBLite consensus disorder prediction 187 277 - -
Ahy5g3363 696 SUPERFAMILY WRKY DNA-binding domain 480 548 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy5g3363 696 MobiDBLite consensus disorder prediction 665 696 - -
Ahy5g3363 696 MobiDBLite consensus disorder prediction 400 460 - -
Ahy5g3363 696 Gene3D WRKY domain 475 541 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy5g3363 696 SUPERFAMILY WRKY DNA-binding domain 270 330 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy5g3363 696 Gene3D WRKY domain 266 331 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy5g3363 696 MobiDBLite consensus disorder prediction 323 368 - -
Ahy5g3363 696 SMART WRKY_cls 271 329 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy5g3363 696 SMART WRKY_cls 488 547 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g3363 Ahy-Chr5 115464557 115468200 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g3363 1 691 WRKY Transcription Factor Family AT5G56270 52.387 0.0 589
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Ahy5g3363 WRKY 3.50E-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g3363 K18835 - gmx:100127395 1066.22