Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ahy5g3362 | ATGAACATGTCACTTCTTCTTCTTATTGTCACACTCTTGATGGCTACAGTTAAAGTTGCAGTTACATCTTCTTCTGATGCTGTTACGCTGCTTATGAGATTCAAGAACTCCCATGTCTCCTCTGATTCAAACAACTTCCTGGCTGACTGGTCCTCCTCCAAGCCCTGCACGTGGAGGGGCATCACGTGCTCCCCCCAAGGTCAAGTCACATCCATCAACCTCACCGGAGCAGGCCTCGCTGGCACCCTTGACCTCCCTACTCTCACGGCTTTGCCTTCTCTGCACCACCTTGTGTTGCGTGGCAACTACTTCTCCTTAGGGAATCTCTCAGTCTCTTCCTTCTGCGCTCTGCAGACGCTTGATCTTTCCTCCAACAACTTCTCTGGAAACTTTCCCTTCCACCAACTTCTTCCATGTCGAGCTCTCACCTATCTCAACTTGTCAAGGAATCTGATTACTGGCGCCACGGCCACCCCTTTTGGCTTCGCTGCTTCTCTGCTTCAGCTTGACTTGTCGAGGAACCAGGTTTCCCAGCCTGAGATTTTGACTTACACTCTCTCCAATTGTCAGGCTTTGACTCTGCTTAATTTGTCTGACAACCGAATCTCTGCTCAACTCAGTGAAACTAGTCTTGCTGCTTCTTGTGCCAACCTCACTACTCTCGACCTCTCCCATAATCAGCTCTCCGGGGAGTTGCCGCCGAGTTTCGTGGGGGATTCTTTGGAGCTTTTGGATCTCTCTGGCAACAACTTTTCAGGGATGTTCTCCAGGTTTGGGTTTGGGAGCTGCAGGAACCTTGTTAGGTTGAGTTTATCTCACAATGTGGTCTCTGGTGGAGAGTATCCAAGCAGCCTGAGGAATTGCCAGGCTCTGGAGACTCTGGATCTTTCTCACAATGACCTTGGACCAATCATTCCTGGGGCTCTTCTTGCAGGTCTCAAGAGCTTGAAGGAACTCTTTTTGGGGAGAAATAACTTGAGAGGGGAAATTCCTGCTGAGCTTGGAATGGCTTGTGATTCTCTTGTGGTTCTTGATCTCTCTGATAATAAGCTTTCGGGTGAGTTGCCTTTGACTTTTGGGGACTGTTCTTCTCTGCAGAGTCTTAACCTTGCTAAGAATTATCTCCATGGAGATTTCCTCACTTCAGTTGTAAGCAAACTTTCAAGTCTTAGGTACCTTTATGTGGCATTCAATAACATCACAGGGCCTGTTCCTCTCTCTCTTGCCAATTGCACACAGCTTCAGGTTCTTGACCTCAGTTCCAATGGCTTCACCGGCACCATCCCCTCTGGCTTTTTCTCTTCTTCCTCGCCTCTCCAAAAGATGCTTCTTGCTGACAATTACCTGGAAGGGAGGGTGCCTGCGGAGCTTGGTGGCTGCAAGAATTTGAGAACAATTGATTTCAGCTTCAACAATTTGAATGGCCCTATACCCTCTCGAGTTTGGTCCCTTCCCAATCTTTCAGACTTGATTATGTGGGCTAACAACCTTACAGGAGAGATTCATGAAGGCATATGCAGCAATGGAGGAAACCTTGAGACCTTGATTCTTAACAACAATTTCATATCAGGCTCCATTCCAAGCTCAATTGCCAATTGCACCAACATGGTTTGGGTCTCACTGGCAAGCAACCGCATTACCGGGGAAATACCTGCCGGAATTGGGAATCTAAAGAAACTTGCCATCCTCCAATTAGGCAACAATTCACTTGCCGGAGGGATCCCACCAGAGCTTGGGAAATGTGAAAGCCTCATATGGTTAGATTTGAATAGTAACAACCTCACTGGTACTATCCCCTCTGATCTTGCCAATCAAGCTGGCTTGGTTATGCCCGGAACTGTTTCTGGGAAGCAGTTTGCATTTGTGAGAAATGAAGGTGGGACAAGCTGCAGGGGAGCCGGAGGTTTGGTCGAATTCGAAGATATCAAGGCAGCAAGGCTTGAGAGTTTTCCTATGGTGCATTCCTGTCCATTAACTCGAATATACTCGGGCGTCACGGTTTATACATTTTCCAAGAATGGCAGCATGATCTACCTTGATCTTTCCTACAATTTCTTGTCTGGAAGCATTCCTGCAAGCTTAGGCGCAATGTCCTATTTACAGGTCCTGAATCTGGGACACAATAAGCTGATTGGGAACATTCCAGAGAGCTTTGGTGGTCTAAAAGCAATAGGAGTGCTTGATCTCTCCCACAATAACCTTCAAGGACTCATCCCTGCTTCATTAGGAGCTCTATCTTTTCTGAGTGACCTTGATGTCTCCAATAATAACCTCACAGGCACCATTCCCACCGGTGGTCAGCTAACAACTTTCCCTTCTTCTAGATACGAAAACAACTCTAATCTTTGTGGTGTTCCTTTGCCCCCTTGCCACGGCGCTTTGAATCGGAATCATGCAGCAGGTTTCCATGCTTGGAAGAAGAAGCAACCTATTGTGACCGGGATTGTGATTGGCCTTGTTTTCTTTGTGTTGTTTTTTGTTGCCTTTGTTCTTGCTTTGTATCAAGTGAAGAAGTACCATTGGAAGGAGGAACAGAGAGAAAAGTACATAGAAAGTCTTCCAACTTCAGGTAGCAGCAGTTGGAAACTATCAAGCATTCCTGAGCCTCTCAGCATCAATGTTGCCACCTTTGAGAAACCACTGCGAAAGTTGACATTCGCGCATCTTCTCGAGGCTACTAACGGTTTCAGTGCCGAAACCTTGATAGGGTCTGGTGGTTTTGGTGAAGTCTACAAGGCTAAGCTGAAAGATGGTTGTGTTGTTGCTATCAAGAAGCTTATTCATGTAACAGGCCAGGGAGACAGAGAGTTCATGGCTGAAATGGAAACCATTGGAAAGATTAAGCACAGAAACCTTGTTCCATTGCTCGGTTACTGTAAAATTGGAGAGGAGAGGCTTCTTGTGTATGAGTACATGAAATGGGGAAGTCTAGAGGCTGTTCTTCATGATCGTGCCAGATCGAAGCTTGATTGGGGAGCAAGAAAGAAGATTGCCATAGGATCAGCAAGAGGACTTGCATTTCTACACCATAGTTGTATTCCTCATATTATACACCGCGACATGAAGTCCAGCAACATTCTTCTTGATGAAAATTTTGAGGCTAGAGTTTCAGATTTTGGCATGGCAAGATTGGTTAATGCCCTGGACACTCATCTCAGTGTTAGCACACTTGCTGGAACACCAGGTTATGTACCTCCTGAGTACTATCAGAGTTTTAGGTGCACAACAAAGGGTGATGTCTATAGTTATGGTGTCATACTTCTAGAGCTTTTATCCGGGAAGAGGCCGATTGACTCGTCCGAGTTTGGTGATGACAACAATCTGGTTGGATGGTGTAAGCAACTTCACAAAGAGAAAAGGAGTAGTGAAATTCTAGATCCTCACTTAATCAAGCAAGCATCTAGTGAAGGTGAACTCTACCAGTGTTTGAGAATTGCCTTTGAGTGTTTAGATGAGAGACCGTATCGGAGACCAACTATGATTCAAGTCATGGCAATGTTTAAGGAGATTCAAGCTGATACAGATAATGATGTCCTTGATGCCTTCTCTATGAAATGCAATGTCATTAAGGAAGCATAA | 3579 | 0.4579 | MNMSLLLLIVTLLMATVKVAVTSSSDAVTLLMRFKNSHVSSDSNNFLADWSSSKPCTWRGITCSPQGQVTSINLTGAGLAGTLDLPTLTALPSLHHLVLRGNYFSLGNLSVSSFCALQTLDLSSNNFSGNFPFHQLLPCRALTYLNLSRNLITGATATPFGFAASLLQLDLSRNQVSQPEILTYTLSNCQALTLLNLSDNRISAQLSETSLAASCANLTTLDLSHNQLSGELPPSFVGDSLELLDLSGNNFSGMFSRFGFGSCRNLVRLSLSHNVVSGGEYPSSLRNCQALETLDLSHNDLGPIIPGALLAGLKSLKELFLGRNNLRGEIPAELGMACDSLVVLDLSDNKLSGELPLTFGDCSSLQSLNLAKNYLHGDFLTSVVSKLSSLRYLYVAFNNITGPVPLSLANCTQLQVLDLSSNGFTGTIPSGFFSSSSPLQKMLLADNYLEGRVPAELGGCKNLRTIDFSFNNLNGPIPSRVWSLPNLSDLIMWANNLTGEIHEGICSNGGNLETLILNNNFISGSIPSSIANCTNMVWVSLASNRITGEIPAGIGNLKKLAILQLGNNSLAGGIPPELGKCESLIWLDLNSNNLTGTIPSDLANQAGLVMPGTVSGKQFAFVRNEGGTSCRGAGGLVEFEDIKAARLESFPMVHSCPLTRIYSGVTVYTFSKNGSMIYLDLSYNFLSGSIPASLGAMSYLQVLNLGHNKLIGNIPESFGGLKAIGVLDLSHNNLQGLIPASLGALSFLSDLDVSNNNLTGTIPTGGQLTTFPSSRYENNSNLCGVPLPPCHGALNRNHAAGFHAWKKKQPIVTGIVIGLVFFVLFFVAFVLALYQVKKYHWKEEQREKYIESLPTSGSSSWKLSSIPEPLSINVATFEKPLRKLTFAHLLEATNGFSAETLIGSGGFGEVYKAKLKDGCVVAIKKLIHVTGQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYMKWGSLEAVLHDRARSKLDWGARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNILLDENFEARVSDFGMARLVNALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDSSEFGDDNNLVGWCKQLHKEKRSSEILDPHLIKQASSEGELYQCLRIAFECLDERPYRRPTMIQVMAMFKEIQADTDNDVLDAFSMKCNVIKEA* | 1193 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ahy5g3362 | 1192 | ProSiteProfiles | Leucine-rich repeat profile. | 290 | 311 | IPR001611 | GO:0005515 | |
| Ahy5g3362 | 1192 | ProSiteProfiles | Protein kinase domain profile. | 896 | 1179 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Ahy5g3362 | 1192 | Pfam | Leucine Rich repeat | 214 | 231 | IPR001611 | GO:0005515 | |
| Ahy5g3362 | 1192 | Pfam | Leucine Rich repeat | 288 | 302 | IPR001611 | GO:0005515 | |
| Ahy5g3362 | 1192 | SUPERFAMILY | L domain-like | 665 | 788 | - | - | |
| Ahy5g3362 | 1192 | Pfam | Protein kinase domain | 898 | 1165 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Ahy5g3362 | 1192 | Pfam | Leucine rich repeat | 699 | 758 | IPR001611 | GO:0005515 | |
| Ahy5g3362 | 1192 | Pfam | Leucine rich repeat | 340 | 400 | IPR001611 | GO:0005515 | |
| Ahy5g3362 | 1192 | Pfam | Leucine rich repeat | 413 | 473 | IPR001611 | GO:0005515 | |
| Ahy5g3362 | 1192 | Pfam | Leucine rich repeat | 141 | 202 | IPR001611 | GO:0005515 | |
| Ahy5g3362 | 1192 | Gene3D | Ribonuclease Inhibitor | 19 | 133 | IPR032675 | - | |
| Ahy5g3362 | 1192 | Gene3D | Phosphorylase Kinase; domain 1 | 859 | 971 | - | - | |
| Ahy5g3362 | 1192 | Pfam | Leucine Rich Repeat | 511 | 533 | IPR001611 | GO:0005515 | |
| Ahy5g3362 | 1192 | Gene3D | Ribonuclease Inhibitor | 160 | 790 | IPR032675 | - | |
| Ahy5g3362 | 1192 | SUPERFAMILY | RNI-like | 310 | 601 | - | - | |
| Ahy5g3362 | 1192 | SMART | serkin_6 | 896 | 1167 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Ahy5g3362 | 1192 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 1016 | 1028 | IPR008271 | GO:0004672|GO:0006468 | |
| Ahy5g3362 | 1192 | SUPERFAMILY | RNI-like | 71 | 401 | - | - | |
| Ahy5g3362 | 1192 | Gene3D | Transferase(Phosphotransferase) domain 1 | 972 | 1188 | - | - | |
| Ahy5g3362 | 1192 | SUPERFAMILY | Protein kinase-like (PK-like) | 877 | 1167 | IPR011009 | - | |
| Ahy5g3362 | 1192 | PANTHER | UNNAMED PRODUCT | 8 | 1185 | - | - | |
| Ahy5g3362 | 1192 | Pfam | Leucine rich repeat N-terminal domain | 26 | 64 | IPR013210 | - | |
| Ahy5g3362 | 1192 | ProSitePatterns | Protein kinases ATP-binding region signature. | 902 | 925 | IPR017441 | GO:0005524 | |
| Ahy5g3362 | 1192 | SMART | LRR_typ_2 | 215 | 238 | IPR003591 | - | |
| Ahy5g3362 | 1192 | SMART | LRR_typ_2 | 745 | 768 | IPR003591 | - | |
| Ahy5g3362 | 1192 | SMART | LRR_typ_2 | 484 | 508 | IPR003591 | - | |
| Ahy5g3362 | 1192 | SMART | LRR_typ_2 | 387 | 410 | IPR003591 | - | |
| Ahy5g3362 | 1192 | SMART | LRR_typ_2 | 313 | 337 | IPR003591 | - | |
| Ahy5g3362 | 1192 | SMART | LRR_typ_2 | 288 | 312 | IPR003591 | - | |
| Ahy5g3362 | 1192 | SMART | LRR_typ_2 | 557 | 581 | IPR003591 | - | |
| Ahy5g3362 | 1192 | SMART | LRR_typ_2 | 697 | 720 | IPR003591 | - | |
| Ahy5g3362 | 1192 | SMART | LRR_typ_2 | 411 | 435 | IPR003591 | - | |
| Ahy5g3362 | 1192 | SMART | LRR_typ_2 | 721 | 744 | IPR003591 | - | |
| Ahy5g3362 | 1192 | Pfam | Brassinosteroid receptor island domain | 607 | 671 | IPR045381 | - | |
| Ahy5g3362 | 1192 | Gene3D | - | 614 | 671 | - | - | |
| Ahy5g3362 | 1192 | PANTHER | RECEPTOR-LIKE PROTEIN KINASE BRI1-LIKE 3 | 8 | 1185 | - | - | |
| Ahy5g3362 | 1192 | PRINTS | Leucine-rich repeat signature | 218 | 231 | - | - | |
| Ahy5g3362 | 1192 | PRINTS | Leucine-rich repeat signature | 721 | 734 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Ahy5g3362 | Ahy-Chr5 | 115457012 | 115461162 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Ahy5g3362 | 5 | 1185 | Receptor kinase-like Gene Family | AT1G55610 | 63.447 | 0.0 | 1506 |
Transcription factors information
| Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
|---|---|---|---|---|---|---|---|
| PK | RLK-Pelle_LRR-Xb-1 | Ahy5g3362 | Pkinase | 3.30E-47 | CL0016 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ahy5g3362 | - | - | gmx:100779072 | 1652.88 |