Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g3350 ATGGGAAGAACAATGGTTATCATCAGGCTGTTATTGCTGGTATCTTCACTTGTCTTATCAGCATCAAGAAGAGTACCTTCTTCTTCTCATTCTTCTGGTAACATTGATTGGTGGTGCAACCTAACGCCACACCCTGGAACATGCAAGTACTACTTAGGTCAAAGCAACCAACAGCACACAACAATAATCAAGCACAAAACCGAGTTGAGGAGCATGCTTGTGCAATCTGCATTAGAGGAAGCAACCATCATGCAAAAGGAAGCACATGGTTTGGACCAAAACTTGATCAAGACAAAGAACCATGAAGCTGTGCATGGCGATTGCTTGAAGCTCTACGACGACACCATCTTCCATCTCAAGCGTACCCTCGAATGCCTTAACAACAACAATTGTTCAGCGGTTGATGCACAGACATGGCTCAGCACTGCTCTCACAAACATCCAAACGTGTCAAACGGGTGCACAAGAACTCAGCGTTCAAGATTTCAAGGTTTCATCTAAGAACACCAACGTCACCGAGATGGTGAGGAACAGCTTAGCCATCAACTTGGATTTCGTCAAGATGATGAAGCAACAACCACAAGCAAATCGCGCATTAGCAGAAGCAGAAGTAGAGGGAGAAGAAGAAGAAGCAGAAGACGATTTTCCGAGCTGGTTTTCCGGTCACGAAAGGAGGCTTCTTCAATCTAGCGCGATAAAGGCTCACGTTGTGGTGGCGAAAGACGGATCGGGGAATTTCAAGACGGTGCAAGAAGCGCTGAACGCGGCGGCGAAGAGAACCGTGAAGACAAGCAGATTTGTAATACACGTGACAAAAGGAGTATACAAAGAAAACATAGAGGTGGAGAAAAACAACGATAACGTGATGCTGGTTGGTGACGGCATGAGAAACACCATCATTAGCGGCAGCAGAAGCTCTCAAGACGGTTACACAACATACAGCTCCGCAACCGCCGGCATAGATGGGCTTCACTTCATCGCAAGAGACATCACTTTCCAAAACACCGCGGGCCCACGCAAGGGCCAAGCTGTGGCCCTGAGATCCGCCTCCGACCTCTCTGTGTTCTACAAGTGCGGCATTGTGGGCTACCAAGACACCCTCATGGCCCACGCGCAGCGCCAGTTCTACAGACAGTGCTACATCTACGGCACCGTTGACTTCATCTTCGGCAACGCCGCCGTGGTCTTCCAAAACTGTCACATATTTGCAAGAAAGCCCCTGGATGGGCAGGCCAACACCATCACCGCACAGGGCCGAGGGGATCCCTTCCAGAACACCGGCATCTCCATCCACAAATCCGTTATCAAAGCCGCACCCGATCTCGTTCCTGTTTTGGACAAGGTTCAGACCTTCTTGGGCCGGCCCTGGCAGCAGAACGCTAGGGTTGTTGTTATGAGGACTTACTTGGACTCTCTTATAAGCCCATTGGGCTGGGATGAATGGAATGGATCTGACTTTGCCAAGGATACTTTATATTTTGGAGAGTATGAGAATTCTGGGCCTGCTTCCGATACAAGCAAAAGAGTGAAGTGGCCCGGTTTTCATGTGATATCAAACCCAAAAGAGGCTTCACAATTCACTGTGACTTCTCTTCTTGCTGGTCGCACCTGGTTGCCTACCACATCTGTTCCCTTCAGCTCTGGCCTCTGA 1650 0.4915 MGRTMVIIRLLLLVSSLVLSASRRVPSSSHSSGNIDWWCNLTPHPGTCKYYLGQSNQQHTTIIKHKTELRSMLVQSALEEATIMQKEAHGLDQNLIKTKNHEAVHGDCLKLYDDTIFHLKRTLECLNNNNCSAVDAQTWLSTALTNIQTCQTGAQELSVQDFKVSSKNTNVTEMVRNSLAINLDFVKMMKQQPQANRALAEAEVEGEEEEAEDDFPSWFSGHERRLLQSSAIKAHVVVAKDGSGNFKTVQEALNAAAKRTVKTSRFVIHVTKGVYKENIEVEKNNDNVMLVGDGMRNTIISGSRSSQDGYTTYSSATAGIDGLHFIARDITFQNTAGPRKGQAVALRSASDLSVFYKCGIVGYQDTLMAHAQRQFYRQCYIYGTVDFIFGNAAVVFQNCHIFARKPLDGQANTITAQGRGDPFQNTGISIHKSVIKAAPDLVPVLDKVQTFLGRPWQQNARVVVMRTYLDSLISPLGWDEWNGSDFAKDTLYFGEYENSGPASDTSKRVKWPGFHVISNPKEASQFTVTSLLAGRTWLPTTSVPFSSGL* 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g3350 549 TIGRFAM PME_inhib: pectinesterase inhibitor domain 8 182 IPR006501 GO:0004857
Ahy5g3350 549 Gene3D - 229 549 IPR012334 -
Ahy5g3350 549 SMART PMEI_2 30 181 IPR006501 GO:0004857
Ahy5g3350 549 CDD PMEI-like_3 37 182 - -
Ahy5g3350 549 ProSitePatterns Pectinesterase signature 2. 381 390 IPR033131 -
Ahy5g3350 549 PANTHER PECTINESTERASE 10 548 - -
Ahy5g3350 549 Pfam Pectinesterase 235 534 IPR000070 GO:0030599|GO:0042545
Ahy5g3350 549 SUPERFAMILY Pectin lyase-like 230 548 IPR011050 -
Ahy5g3350 549 Pfam Plant invertase/pectin methylesterase inhibitor 35 181 IPR006501 GO:0004857
Ahy5g3350 549 PANTHER PECTINESTERASE 10 548 - -
Ahy5g3350 549 Gene3D Invertase/pectin methylesterase inhibitor family protein 30 184 IPR035513 -
Ahy5g3350 549 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 33 182 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g3350 Ahy-Chr5 115372002 115373980 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g3350 38 549 Carbohydrate Esterase AT5G51490 54.511 0.0 576
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g3350 K01051 - gmx:100806133 766.148