Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g3349 ATGAATACATTTTGTCATGTTCCACCGGGTTTTAGGTTCCATCCAACGGATGAAGAACTCGTTGATTACTACCTTAGAAAAAAAGTTAATTCATGTAGGATTGACCTTGATGTCATCAAAGATGTTGACCTCTACAAAATCGAACCCTGGGATCTTCAAGAGCTATGCAGACTAGGAACAGAAGAGCAAAATGAGTGGTACTTCTTTAGTCATAAAGATAAAAAATATCCAACGGGAACTCGCACAAATAGAGCAACTGCAGCAGGGTTTTGGAAAGCAACGGGGAGGGACAAAGCTATATATTCCAAGCATGACTTGATTGGGATGAGAAAGACTCTAGTCTTCTACAAAGGTCGAGCCCCTAATGGCCTCAAATCTGATTGGATTATGCACGAATATCGTCTTGAAACCGATCAAACTGGGGCTGCTACTCCTCAGGAAGAAGGATGGGTTGTGTGTAGAGTGTTCAAGAAGAGAGTGACTTCCATTATGCGTAAGATGAGTGATCATGATTCCCCATCCTGCACTTGGTATGATGACTCCTCTTTCATGCACCAACAACCAGATCACTTTGACAACTCTTGTTCTTCTTCATCAAAGCACCAACTAATCCCTAATAATAACTGTGATGTCTTCTACCAACAACACAACAACAACTTGCCTCTTCATCATCTTCCACTTCTTCATCAAACTGCTGCTCTTTCCAATCATAATAATAATAATCCAATCATGGCACCACCATTTGCTGCTATTAATAATAATGAAACTACTGCTTTTCAAGAACAAGGGAAAAGCTTAATTCATCATCAGGCACTACTCTATGGAAATTTAAATGAAGAGCAAGCTTCTTCTTCAGCTGATTGGAGACTTGTTGACAAGTTTGTTTCATCACAGCTTAGAGAAGATCATCATGTCTCCAAACAAGAATTGATGATGCCAGAAAATAATAATAATAATAATAATGATAATGGTGCCTCAACATCAAACTCAAGCTGTCCAATAATGGACGTGTGGAAATAG 1020 0.3912 MNTFCHVPPGFRFHPTDEELVDYYLRKKVNSCRIDLDVIKDVDLYKIEPWDLQELCRLGTEEQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAIYSKHDLIGMRKTLVFYKGRAPNGLKSDWIMHEYRLETDQTGAATPQEEGWVVCRVFKKRVTSIMRKMSDHDSPSCTWYDDSSFMHQQPDHFDNSCSSSSKHQLIPNNNCDVFYQQHNNNLPLHHLPLLHQTAALSNHNNNNPIMAPPFAAINNNETTAFQEQGKSLIHHQALLYGNLNEEQASSSADWRLVDKFVSSQLREDHHVSKQELMMPENNNNNNNDNGASTSNSSCPIMDVWK* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g3349 339 ProSiteProfiles NAC domain profile. 7 158 IPR003441 GO:0003677|GO:0006355
Ahy5g3349 339 MobiDBLite consensus disorder prediction 307 339 - -
Ahy5g3349 339 MobiDBLite consensus disorder prediction 310 339 - -
Ahy5g3349 339 Gene3D NAC domain 16 161 IPR036093 GO:0003677|GO:0006355
Ahy5g3349 339 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 4 323 - -
Ahy5g3349 339 PANTHER NAC DOMAIN-CONTAINING PROTEIN 7-LIKE 4 323 - -
Ahy5g3349 339 SUPERFAMILY NAC domain 5 158 IPR036093 GO:0003677|GO:0006355
Ahy5g3349 339 Pfam No apical meristem (NAM) protein 8 135 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g3349 Ahy-Chr5 115368692 115371579 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g3349 1 339 NAC Transcription Factor Family AT1G12260 50.134 3.58e-115 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Ahy5g3349 NAM 1.90E-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g3349 - - aip:107645037 632.484