Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g3346 ATGAGCTCCTCAAACAAGAGCAGCATTAAGAATGGTGACACCCATAACTCCCTTCAGCTGGAATCGGGGTCACGAGAACAGCCAAGTCCAATCTGGAAGCTGGTGGCGGTGGCCTCCATCGCTGCTGGAATCCAGTTTGGCTGGGCACTACAGCTTTCCCTCCTAACACCTTATAGCCAGCTTCTCGGAGTACCTCACCAATGGTCTTCTTTCATCTGGCTTTGTGGCCCCATCTCTGGCATGATTGTCCAGCCAATAGTGGGTTACTACAGCGACAGATGTACATCCAAACTCGGCCGCCGTCGACCTTTTATCCTTGCAGGCGCGGCTGCTGTCGCCATAGCTGTTTTTCTCATTGGCTTTGCCGCCGACATTGGCCACGCCTTTGGGGACAATCTGACCAAGAAAACCCGTCCACGCGCGGTAGCCATTTTTGTGATCGGGTTCTGGATCTTGGATGTGGCGAACAACATGCTCCAAGGCCCCTGTCGAGCGTTTCTTGGTGACCTTGCCGCGGGAGACGAACGGAAAACGAGATTGGCAAATGCGTTCTTTTCATTCTTTATGGCGGTAGGAAGCGTACTGGGTTACGGCGCGGGTTCCATTGACAGCCTCCACAAAGTGTTCCCATTCACGCAAACAAAAGCGTGTGATGTGTTCTGCGCAGACCTGAAAAGCTGCTTCTTCTTCTCGATCCTCTTGCTGCTGGTGTTAACGGGTGTGGCTCTGTTCTATGTGAAGGACAAACAAGTATTACGTGAGAAATCACGTATGGGAGAAGAGGAAGATGAGAGGTCCGTAGTGGTTGCATGCTTTGGAGAAATGTTAGGGGCACTGAAGGGGCTGAAGAAGCCAATGTTATTATTGATGGCAGTTACGGCAATAAACTGGTCGGCGTGGTTCTCATACTTTCTGTACAACACTGATTGGATGGGTAAAGAGGTGTATGGTGGGAAAGTTGGGGATCAAGCGTATAAAGACGGTGTCCAGAAGGGTGCTTTGGGTCTTTTGATAAACTCAGTGGTTTTGGGTGTTATGTCTTTGGGTGTGGAGCCCATTGGACGTGCGGTTGGTGGCGCCAAGAACCTCTGGGGAATTGTCAATTTAATCCTTGCCGCTGGTTTGGCCATGACTGTTTATATCAGTAAGGTAGCTATGCATGAGCGCCACCTTAACCCCCGGTATATTGGTCATCCCTCCACTGGCGTTCAGGCTGGAGCCTTGTCCTTCTTTGCCGTTCTCGGCATTCCTCTCGCGATAACATTTAGTATTCCATTTGCATTAGCATCTATCTACTCAAGTGAATCGGGTGCAGGACAAGGTTTATCTCTGGGAGTTCTCAATCTTGCAATTGTGATTCCACAGATGATAGTGGCATCAATCAGCGGACCATGGGACAAGTTATTTGGAGGTGGTAATTTGCCGGCGTTTGTAGCAGGTGCGGTGGCGGCTGCCGTGAGTAGCATAATGGCAATTTTTATGTTGCCGTCTACGAAGCAATCAGAAGCGGCTAAAGCTGCACTTCCCATGGGCGGTTTCCATTAG 1545 0.5029 MSSSNKSSIKNGDTHNSLQLESGSREQPSPIWKLVAVASIAAGIQFGWALQLSLLTPYSQLLGVPHQWSSFIWLCGPISGMIVQPIVGYYSDRCTSKLGRRRPFILAGAAAVAIAVFLIGFAADIGHAFGDNLTKKTRPRAVAIFVIGFWILDVANNMLQGPCRAFLGDLAAGDERKTRLANAFFSFFMAVGSVLGYGAGSIDSLHKVFPFTQTKACDVFCADLKSCFFFSILLLLVLTGVALFYVKDKQVLREKSRMGEEEDERSVVVACFGEMLGALKGLKKPMLLLMAVTAINWSAWFSYFLYNTDWMGKEVYGGKVGDQAYKDGVQKGALGLLINSVVLGVMSLGVEPIGRAVGGAKNLWGIVNLILAAGLAMTVYISKVAMHERHLNPRYIGHPSTGVQAGALSFFAVLGIPLAITFSIPFALASIYSSESGAGQGLSLGVLNLAIVIPQMIVASISGPWDKLFGGGNLPAFVAGAVAAAVSSIMAIFMLPSTKQSEAAKAALPMGGFH* 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g3346 514 MobiDBLite consensus disorder prediction 1 24 - -
Ahy5g3346 514 CDD MFS_SLC45_SUC 34 493 - -
Ahy5g3346 514 PANTHER SUGAR TRANSPORTER 15 502 - -
Ahy5g3346 514 Gene3D MFS general substrate transporter like domains 27 499 IPR036259 -
Ahy5g3346 514 TIGRFAM GPH_sucrose: sucrose/H+ symporter 30 500 IPR005989 GO:0005887|GO:0008515|GO:0015770
Ahy5g3346 514 Pfam MFS/sugar transport protein 46 244 - -
Ahy5g3346 514 PANTHER SUCROSE TRANSPORT PROTEIN SUC7-RELATED 15 502 - -
Ahy5g3346 514 SUPERFAMILY MFS general substrate transporter 33 501 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g3346 Ahy-Chr5 115343093 115345841 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g3346 15 514 Sucrose Transporter Gene Family AT1G71890 63.261 0.0 643
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g3346 K15378 - gmx:100786411 678.707
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g3774 15 160400610 160403042 Ahy5g3346 5 115343093 115345841 hybridization