Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g3341 ATGGCCAGGTATGAGTACATGTACACCTCTTTCCTTTGTGTTTTTCTTCTCTATTGCTGCTACTGCCCCATCATGGTGATGTCTCAGCTATCTCAAAACCAAACTAGCACCATGGCCAATCTCTCCAAGCTACTTGGTACCTCTGTTCCATGGAATAGTGGCAATCATTCAAATCCATGTTCATGGAATGGAGTCACTTGTGACTCTACCAAATCCCATGTCATCATGATTTCTCTATCTGGGAACTCTCTCTCTTCCAGTGACTTCCTTCCTGTTCTTTGCCAACTTGAAACCCTGCAGCATCTTGATGTATCCAACAACAGTCTCGCCTCAATCCCTGATGAGTTCATTACTGAATGCGGAAAGATGAAGTACTTAAAGCTGCTGAATTTCAGTAGAAACCTCTTATCAGGTTCTTTACCTACTTTCCTTGGTTTTGATGCACTTGAATACCTGGACATGTCTTTCAATGTATTGGGAAGTAGTATTGATATTCAGTTAGATGAAATGATTAGGCTCAAGAGTTTGAACCTTACTCACAACAACTTCAATGGTGCTCTTCCCACCAAATTGGGCAAGTCCATGGTTCTGGAGCAACTTGTGCTCTCTAACAACCAATTTCAAGGAGAAATCCCTGAAGAACTGTTTAGTTATGAAAACTTGACTTCGATTGATCTCGGGGGAAATACCCTTTCAGGTGCAATTCCTACCCATATTGTACAGCTATCTAAGTTGCAAACTTTGATTCTTTCCTCTAATCACCTCAGTGGTCCAATTCCAATCTCAATCCTGAACATCACAACCCTTGTAAGATTTGCTGCAAACCTGAACCGTTTCAATGGTTCTTTACCTTCTGACATTTCAAATAATCTTATCAGTTTGGATCTTAGTGGCAATAATTTGTCTGGTCCCATTCCAAAAAACATTTTATCTTCACCAAAAATGGAGGTTGTGGATTTGTCCAATAATACTTTGAGTGGAACATTGTTACTCACAAGTATTTCTCCTAGCATGATCAGGTTGAGATTAGGGAACAATTTGCTGAAGGGAGACATTCCCTCAGATGCTTTTGTAAAAGCTCAGAATTTGACATACTTGGAGCTGGAAAGTAATGCACTGACAGGAGCAATTCCAGCTATATTGGGTTCTTGCCTCAACCTGGCATTGCTGGATTTGTCTCAGAATCATTTGAGTGGGACATTGCCACTAGAGCTTGGAAATCTTCGCAATCTTCAAGTCTTAAAACTTCAAATGAACAAGTTTAATGGCACAATCACAACTCCATTTCAAATTGGCCAACTACAAAAGTTGTTAACACTGAATTTGAGCCAGAACTCTTTGACCGGATCGATTCCATCCCAGATATCAAGCTTGAGCAACCTTAAGTTCCTGAACTTGCAAATGAACAACCTGAGTGGTTCCATACCTCCATCCATTGGCATCTCAAAAAGCCTTCTGGATCTTCAACTAGGTGGAAACCAACTAAGTGGTGCTATCCCAAGTATGCCAATATCTCTACAGGTTGCCGTGAATCTTAGTCACAACAACTTTAGTGGATCCATTCCCAGCAGTTTGAGTAGTTTGGATAACCTGGAAATATTGGATCTCTCGTATAACAAATTTTCTGGTGGAGTTCCTGGTGATCTAGCCGGAATGTCATCTTTGACAGAGTTGTTACTTACTAACAACAATCAGCTTTCTGGTGTTCTTCCAAAATTTACCCATTTTGTTCAAGTTGAATACAATGGAACCAGTTTAGTACTGGCTCCTACATCGGACAACCCAACACCGAGCTATTACCCGGGATCTAGAAAGAAGGGATCATCTGTTGTTGTGGCAATCCTTGTTGCAATTGCAGCAGCCGTGTTTCTTGTTGGCCTTGTCACTCTGCTGCTTGTACTTGTGTCACGACACTATTCGAAGGTTAACGATGAGAATATACATTCAGGTGAAGATCATCGCCTTCCTCAGGTTGTCCAAAGTCATTTGTTAACTCTTAATGGTCTCCACAGATCAAACATTGACTTCTCCAAGGCCATGGAAGCAGTTGCTGAAACATCCAATGTTACTTTGAAGACCAGGTTTTCAACTTATTACAAGGCCATCATGCCATCTGGATCAATCTATTTTGTCAAGAAGATGAATTCAACTGAAAGGGCATTGCCAGCGAGCAGCCATGTTAGAATTGGGAAAGAGATGGAGGTCTTGGCGAAATTGAACAATTCAAATGTCATGACTCCTTTAGCCTATGTTTTGTCCAGTCATGCAGTTTACACATTATATGAGTTTGTCTCAAATGGTTCCCTCTTTGATGTTCTTCATCATGGAAGCATGGGAAACTCTTTGGATTGGGCTAGCAGATATAGTATAGCAGTTGGTGTGGCTCAAGGTCTCTCTTTTCTTCATGGCATCACCTCAAGTCCATTACTACTTCTTGATCTGTCAAGTAAAAGTATTATGCTCAAGTCCCTCAAGGAGCCTCTGGTTGGAGATATTGAACACTACAAGGTCATTGATCCTTCCAAAAGTACAGGAAATTTTTCTGCTCTTGCTGGTTCTGTTGGCTATGTTCCTCCAGAGTATGCATACACAATGACAGTAACAGTGGCTGGGAATGTATATAGCTTTGGGGTCATCCTGCTTGAACTGCTGACTGGAAAGCCTGCAGTGACAGAGGGAACCGAATTGGTGAAGTGGGTTTTGCATAATTCAATGAACAAAGATTACATTCTTGATTCTAATGTTAGCAAAACATCCCAAGCTGTGAGAAACCAGATGCTAGCAGTTCTGCAGATTGCTCTTGTTTGTGTTAGTACATCCCCAGAAACAAGACCAAAGATGAAGAGTGTGCTAAGAATGCTTCTTAATGCTAGATAG 2877 0.4115 MARYEYMYTSFLCVFLLYCCYCPIMVMSQLSQNQTSTMANLSKLLGTSVPWNSGNHSNPCSWNGVTCDSTKSHVIMISLSGNSLSSSDFLPVLCQLETLQHLDVSNNSLASIPDEFITECGKMKYLKLLNFSRNLLSGSLPTFLGFDALEYLDMSFNVLGSSIDIQLDEMIRLKSLNLTHNNFNGALPTKLGKSMVLEQLVLSNNQFQGEIPEELFSYENLTSIDLGGNTLSGAIPTHIVQLSKLQTLILSSNHLSGPIPISILNITTLVRFAANLNRFNGSLPSDISNNLISLDLSGNNLSGPIPKNILSSPKMEVVDLSNNTLSGTLLLTSISPSMIRLRLGNNLLKGDIPSDAFVKAQNLTYLELESNALTGAIPAILGSCLNLALLDLSQNHLSGTLPLELGNLRNLQVLKLQMNKFNGTITTPFQIGQLQKLLTLNLSQNSLTGSIPSQISSLSNLKFLNLQMNNLSGSIPPSIGISKSLLDLQLGGNQLSGAIPSMPISLQVAVNLSHNNFSGSIPSSLSSLDNLEILDLSYNKFSGGVPGDLAGMSSLTELLLTNNNQLSGVLPKFTHFVQVEYNGTSLVLAPTSDNPTPSYYPGSRKKGSSVVVAILVAIAAAVFLVGLVTLLLVLVSRHYSKVNDENIHSGEDHRLPQVVQSHLLTLNGLHRSNIDFSKAMEAVAETSNVTLKTRFSTYYKAIMPSGSIYFVKKMNSTERALPASSHVRIGKEMEVLAKLNNSNVMTPLAYVLSSHAVYTLYEFVSNGSLFDVLHHGSMGNSLDWASRYSIAVGVAQGLSFLHGITSSPLLLLDLSSKSIMLKSLKEPLVGDIEHYKVIDPSKSTGNFSALAGSVGYVPPEYAYTMTVTVAGNVYSFGVILLELLTGKPAVTEGTELVKWVLHNSMNKDYILDSNVSKTSQAVRNQMLAVLQIALVCVSTSPETRPKMKSVLRMLLNAR* 959
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g3341 958 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 13 955 - -
Ahy5g3341 958 Pfam Leucine rich repeat 510 564 IPR001611 GO:0005515
Ahy5g3341 958 Pfam Leucine rich repeat 98 159 IPR001611 GO:0005515
Ahy5g3341 958 Pfam Leucine rich repeat 197 255 IPR001611 GO:0005515
Ahy5g3341 958 ProSiteProfiles Protein kinase domain profile. 684 958 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy5g3341 958 SUPERFAMILY Protein kinase-like (PK-like) 695 954 IPR011009 -
Ahy5g3341 958 SMART LRR_typ_2 552 575 IPR003591 -
Ahy5g3341 958 SMART LRR_typ_2 458 482 IPR003591 -
Ahy5g3341 958 SMART LRR_typ_2 528 551 IPR003591 -
Ahy5g3341 958 SMART LRR_typ_2 96 119 IPR003591 -
Ahy5g3341 958 SMART LRR_typ_2 434 457 IPR003591 -
Ahy5g3341 958 SMART LRR_typ_2 242 266 IPR003591 -
Ahy5g3341 958 SMART LRR_typ_2 170 194 IPR003591 -
Ahy5g3341 958 Pfam Protein kinase domain 695 952 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy5g3341 958 PANTHER F12K21.25 13 955 - -
Ahy5g3341 958 SUPERFAMILY RNI-like 259 569 - -
Ahy5g3341 958 ProSiteProfiles Leucine-rich repeat profile. 98 119 IPR001611 GO:0005515
Ahy5g3341 958 Gene3D Ribonuclease Inhibitor 427 504 IPR032675 -
Ahy5g3341 958 Gene3D Ribonuclease Inhibitor 28 188 IPR032675 -
Ahy5g3341 958 Gene3D Transferase(Phosphotransferase) domain 1 764 957 - -
Ahy5g3341 958 SUPERFAMILY L domain-like 56 326 - -
Ahy5g3341 958 Gene3D Phosphorylase Kinase; domain 1 657 763 - -
Ahy5g3341 958 Gene3D Ribonuclease Inhibitor 189 288 IPR032675 -
Ahy5g3341 958 Gene3D Ribonuclease Inhibitor 509 585 IPR032675 -
Ahy5g3341 958 PRINTS Leucine-rich repeat signature 528 541 - -
Ahy5g3341 958 PRINTS Leucine-rich repeat signature 387 400 - -
Ahy5g3341 958 Pfam Leucine rich repeat N-terminal domain 51 68 IPR013210 -
Ahy5g3341 958 Gene3D Ribonuclease Inhibitor 289 426 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g3341 Ahy-Chr5 115306794 115309934 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g3341 149 958 Receptor kinase-like Gene Family AT2G41820 37.321 2.36e-143 447
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Ahy5g3341 Pkinase 1.00E-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g3341 - - adu:107491546 1716.44