Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g3338 ATGATGAGTTCATCAGCAAGAAAGGAAGAAGAATATGATGACGACGATGCATGCATGTATGCATTGTTGTTGTCAACTTTTCAAGTGTTCCCTTTCATATTGAATGCTGCTGTTGAACTCAACCTGTTTGAGATATTGTCTGAGTTAGCCCCCAACGGTGCATACTCATCGGTTTCCGAAATCGCTTCAAAGTTTCCTTCACAGCACCCTCAACTCCACAACAGGCTGGACAGAATGCTTCGTGTGCTTGCCAGTTTCTCACTTCTCAATTCGAGTGTCGTCGTCGTCGACGGCGACAAGGTTGAGAGGCTTTATAGTCTCTCACATGCTGCTAAATATTTTCTCAAAAATCAGAGTCATAATCTAGCTTTTTTCTCAAATCTCAACTGCCACCCAGCTCTAACAAGGGTTTGGGTAAACATTAAGGATGCAATTGCTGATGGAGGAACAGAGATTTTCAAGAAGGTTAATGGGATGTCAGTGTGGGAATACATGGAGAAGGATGCAGAACTGAGTGACACTTTCAACAAAGCAATGGCAGGAATGTCTGCCACACATATGAAGAAATACTTGGAAGCATATGATGGATTTGAAGGGTCAACGCTGGTTGATGTTGGAGGAGGTACTGGACACTGCCTCAAAATGATCCTCTCCAAGTACCCTAATATTAAGGGTATTAATTTTGATTTGCCTCAAGTCATTCAACATGCCCCACCCTATCCAGGTATTGTGCACGTTGGAGGAAACATGCATGAAACCATTCCAAAGGGGGATGCCATCATGATTAAGGCTGTTTGTCATAATTGGTCAGATGAGAAGTGTGTAACAGTGCTGAAAAACTGTTATAAAGCACTTGAAGAGAATGGGAAAGTGATTATCTTTGAGATGATTATGCCTGAAGAACCAGATTCAAGCAATGCCTCTAAGCTTGTCTCTGTTGTTGACAATTCAATGTTGCTTCATGCTGGAGGCAAGGAGAGAACAGAGAAAGAATTTGGGAAGCTATGCAAAGACTCTGGATTCACCACTTACCAAGTTGTTTGCCGTACTCTTTCTGTTTTCGGAGTCATAGAATTTTATAAATAA 1086 0.418 MMSSSARKEEEYDDDDACMYALLLSTFQVFPFILNAAVELNLFEILSELAPNGAYSSVSEIASKFPSQHPQLHNRLDRMLRVLASFSLLNSSVVVVDGDKVERLYSLSHAAKYFLKNQSHNLAFFSNLNCHPALTRVWVNIKDAIADGGTEIFKKVNGMSVWEYMEKDAELSDTFNKAMAGMSATHMKKYLEAYDGFEGSTLVDVGGGTGHCLKMILSKYPNIKGINFDLPQVIQHAPPYPGIVHVGGNMHETIPKGDAIMIKAVCHNWSDEKCVTVLKNCYKALEENGKVIIFEMIMPEEPDSSNASKLVSVVDNSMLLHAGGKERTEKEFGKLCKDSGFTTYQVVCRTLSVFGVIEFYK* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g3338 361 CDD AdoMet_MTases 201 293 - -
Ahy5g3338 361 Gene3D Vaccinia Virus protein VP39 115 361 IPR029063 -
Ahy5g3338 361 PIRSF O-mtase 1 361 IPR016461 GO:0008168
Ahy5g3338 361 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 120 359 IPR029063 -
Ahy5g3338 361 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 22 361 IPR016461 GO:0008168
Ahy5g3338 361 Pfam O-methyltransferase domain 138 341 IPR001077 GO:0008171
Ahy5g3338 361 SUPERFAMILY "Winged helix" DNA-binding domain 14 118 IPR036390 -
Ahy5g3338 361 PANTHER O-METHYLTRANSFERASE 11 361 IPR016461 GO:0008168
Ahy5g3338 361 Gene3D - 2 114 IPR036388 -
Ahy5g3338 361 Pfam Dimerisation domain 33 84 IPR012967 GO:0046983
Ahy5g3338 361 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 11 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g3338 Ahy-Chr5 115293214 115295539 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g3338 11 361 Monolignol Biosynthesis Gene Families AT5G54160 50.565 1.12e-113 333
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g3338 - - gmx:100787536 397.897