Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g3328 ATGGAAATTAAGATAACATGTAGAGAAAGCATTAAACCATCATTACCCACTCCCCAAGAGCACAAAAAGCACAAACTATGTTTATTCGATGTGTATCAACTTAACACCTATTTTCCACTAATCCTATTTTACCACAAAGGATCTTCAGACATTTTAACACAATTGAAGAAATCACTATCCGAGGCACTAACAATTTTCTACCCTCTTGCAGGTAGAAAGAGTAGTGATGATCCCTTTTCAATCAATTGCAATGATGAAGGTGCAATCTACATAGAATCCACAATAGTGAACATCACCATTGAAGAGTTCCTCAACCCTCCAAAACTAGAATTGCTTAACGAATTGCTTCCTTGTGAGCCAAACAAGACTCACCCTAACCATGAAGTGTTGCCACAGTTAGTGATCCAAGCCAACACTTTCAAGTGTGGCGGAATAGCTGTTGCAATGTGCAACCTCCACACACTCTTGGATGCTTCTTCTTGCATCACTTTCTTGAAGACTTGGTTTGCAATTTCTAGAGGGTCAGCGGAAGAGATATCATTTCCTAATTTCTCTTCCGCTCCTTCTCTGTTCCCGCCGAGGGTGAACACCTCTGGGTTGATGCGTTCGGGGGTGCTCAACCTCGGCAGGGACATAGAAATTGAAACACTCTGCACCACAAGAAGATTCTTGTTTGATTTCAAAGCCATGAATGAGCTCATATCCAAGGCTGCATTAGGAAATAATGGAAGAATGATGAACACAAACCCTACAAGGTACCAAGCAGTGTCATCATTCATATGCAAACACATGATTATGTCATGCATGAAAGAAGAAGACAAGAATAGGCCAGTGGTAGTGCTGCATGTTGTGGACATGAGGAGAAGAATGGGAGAACCCTTCACACAAAACTCCATTGGGAACTTGCTGTGGCCAGCAGTGATGCTATGTGAGAATGTGAACAAGGACACTGAGATAAGTGAATTGGTAAAGGTGTCAAAGGGTGGAATTGGGAAAGTGACAAAGGAATTGCTGGTGAGAGTTCAAAAGGATGAAGGGTTTTGGTGGAGTGATGAGTGTGGCAAGTTGATGCTTGAAGAGGTGGTGAACAAAGATCCGGTGTCGTTTTTGTTCACAAGTTGGTGTGATATGGGATTCAAAGAGTTGGATTTTGGGTTGGGAAAACCTTTGTGGTTGGCTCAGAAAGGTGGCAATAGTGAAACAATTCCAAACACAGTGGTTTTCATGGACACAAAGGATGGAATGGAAGCATGGATCTCAATGAGACCCCAACACATTGCTACATTGGAAAATGATGTGGATTTTCTCAAATTTGCTCTGCTTAATCCTACTGGTTCAATTCTATTAAATAACATACATTTATTTATGGTGAAGTGA 1377 0.4139 MEIKITCRESIKPSLPTPQEHKKHKLCLFDVYQLNTYFPLILFYHKGSSDILTQLKKSLSEALTIFYPLAGRKSSDDPFSINCNDEGAIYIESTIVNITIEEFLNPPKLELLNELLPCEPNKTHPNHEVLPQLVIQANTFKCGGIAVAMCNLHTLLDASSCITFLKTWFAISRGSAEEISFPNFSSAPSLFPPRVNTSGLMRSGVLNLGRDIEIETLCTTRRFLFDFKAMNELISKAALGNNGRMMNTNPTRYQAVSSFICKHMIMSCMKEEDKNRPVVVLHVVDMRRRMGEPFTQNSIGNLLWPAVMLCENVNKDTEISELVKVSKGGIGKVTKELLVRVQKDEGFWWSDECGKLMLEEVVNKDPVSFLFTSWCDMGFKELDFGLGKPLWLAQKGGNSETIPNTVVFMDTKDGMEAWISMRPQHIATLENDVDFLKFALLNPTGSILLNNIHLFMVK* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g3328 458 PANTHER F21J9.9 1 444 - -
Ahy5g3328 458 Gene3D - 217 437 IPR023213 -
Ahy5g3328 458 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 1 444 - -
Ahy5g3328 458 Gene3D - 1 199 IPR023213 -
Ahy5g3328 458 Pfam Transferase family 1 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g3328 Ahy-Chr5 115228903 115230279 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g3328 3 430 Monolignol Biosynthesis Gene Families AT5G48930 22.940 1.15e-14 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g3328 - - ahf:112804060 907.901