Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g3321 ATGGCGTCTAACACATTGATGAGTTCTACTATATCAGCTTTCCCGTCTCTTCTTTCTTCCTCAAAGTCAAGATTTGCCACTTCAATTCCAATCTCATGCTTTGGAAGCAATGTGTCTTCTCGCTTCTCCATGACTGCTGACTGGATGCCAGGCCAGCCTAGACCCCCTTACCTTGACGGTTCAGCTCCAGGTGACTTTGGATTTGACCCTCTTCGTCTTGGAGCAGTACCAGAGAATCTTGAGAGATTCAAGGAGTCTGAACTTATCCACTGCAGATGGGCTATGCTTGCTGTTCCAGGTATGTTGGTACCAGAGGCATTGGGCTTAGGAAATTGGGTGCAAGCTCAGGAATGGGCTGCGAAGCCCGGAGGCCAAGCAACCTACCTTGGAAACCCTGTTCCATGGGGCACCCTCCCCACCATTTTGGTGATTGAATTCCTTGCTATTGCTTTTGTGGAGCACCAAAGAAGCATGGAGAAAGACCCCGAGAAGAAGAAATACCCTGGTGGTGCCTTTGATCCTCTGGGATACTCTAAGGATCCTAAGAAGTTCCACGAATACAAAATCAAAGAAATCAAGAATGGACGTCTTGCTTTGTTGGCTTTTGTGGGATTCTGTGTGCAACAATCAGCATACCCTGGCACTGGCCCATTGGAGAACTTGGCCACTCACTTGGCTGATCCATGGCACAACAACATTGGAAATGTCATCATTCCCTTTTGA 723 0.4786 MASNTLMSSTISAFPSLLSSSKSRFATSIPISCFGSNVSSRFSMTADWMPGQPRPPYLDGSAPGDFGFDPLRLGAVPENLERFKESELIHCRWAMLAVPGMLVPEALGLGNWVQAQEWAAKPGGQATYLGNPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPKKFHEYKIKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGNVIIPF* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g3321 240 Pfam Chlorophyll A-B binding protein 55 209 IPR022796 -
Ahy5g3321 240 Gene3D Chlorophyll a/b binding protein domain 49 235 - -
Ahy5g3321 240 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 21 234 IPR001344 GO:0009765|GO:0016020
Ahy5g3321 240 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 6, CHLOROPLASTIC 21 234 - -
Ahy5g3321 240 SUPERFAMILY Chlorophyll a-b binding protein 38 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g3321 Ahy-Chr5 115188068 115189984 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g3321 1 196 Chloroplast and Mitochondria Gene Families AT3G54890 79.293 6.79e-105 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g3321 K08907 - gmx:100305992 443.736