Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g3265 ATGTGCTTAGTAACAACGGTGGCGCATCAAAGGGGGTCAGGTGAGTTCATCCGGTTCACGGCGCAGCGTGGCTGTGACGGCGGAGATGAGGAACACGGCGGCGGCGGTGGTGGAAGAAGAAGCAGATCATATGAACAAGAAGTAGGTAACAAGAAAGAAGATGAGGTGGAAAGAATAACAATGCAAGGTTCAATGGAATTGAGTGAGATCATGCTTTCGGCGCTGACAAATAATGTTGTGTCATCAGGTTCTTCTTCTTCTCAATCTCATCAAAGCGGCACCGACTGGTTTGCTGCTGCTTCTCAGCATCATCCTATGATGACGTCAGATTTTGGACACGTGTCATCTTTGTCTTCTTTTACTTCTTCATCTTCTTCTTCTGCTTCTGCTTCCTCTTCATGGGTTGGCCAAAAGAGAGGGCGTGAAGAACAACACCACATGATTGGTGCTTCATCTTCATCTTCTTCTTCCTCTTCTCAATCTTATCAATATCAACATCAACATCATCAGAATTTGGTTCAACATCCTGTTCCTAGATTCTTTGGAACCAATCTTGGTGACTTCAAGGTGCTACCTTCTCATCAACCAGAATCATCTTCAGTGACAGAAGAAGCTTCCTCCATCACCACGGCGGCCACGGCAGCCACGGCAGCCACCGTAACCACCATGACACCGGCAACGCCGTCCAGCGAAGCCGCATCATATGAAGAAACAGGGGAGAGAAGGAGAAGGTACAGAGGAGTTAGGCAAAGGCCATGGGGAAAATGGGCAGCGGAGATTCGAGATCCACACAAGGCGGCAAGAGTGTGGCTCGGAACATTCGACACGGCGGAAGCCGCCGCAAGAGCCTACGACGAAGCCGCATTGAGATTCAGAGGAAACAGAGCAAAACTCAATTTTCCAGAGAATGTAAGAGCAGTGCCACGCCCAATTCAACCACCTTTCTCTGCCGCCGCCGCCACAACCACCGCCACCACACATTTCCGCCACCCTCCGCCGCAGATGTACCATCCAGAACCACCACCACCACCACCATTGGTTCAACAACAGCAGCCACAGTTTCAGGGAAACAATGAGATCAGAGACTATTTGGAATATTCTCTGCTTCTTCAGAGTTCTGGTGATTTTCAACAACATCAACAACAACAAATTAATCAACAACCTTCGAATTTGTTACAACAGTTGTACTATAATTCACAATTGGCGGCGCTTCAATCTTCTTCATCATCATCTTCTTCTTCTTCAGTTGTGCCACCAGCTTCGGTGTTTTCAGCTTCTGCTCAACCGTCCTCTGCTTCACTTCCCCTGTTTCCTAGTCAGCAAATGGTGTTTTTCCGGCCACCGGGAAACCAACCTCACGGCGGCGGAGACGGTGCCGGCGGGTTAAACTTTCTCCCTTCAACTTGGTCAGATACCAGTGGCTATCCACCACCACCTGGTTGA 1443 0.4913 MCLVTTVAHQRGSGEFIRFTAQRGCDGGDEEHGGGGGGRRSRSYEQEVGNKKEDEVERITMQGSMELSEIMLSALTNNVVSSGSSSSQSHQSGTDWFAAASQHHPMMTSDFGHVSSLSSFTSSSSSSASASSSWVGQKRGREEQHHMIGASSSSSSSSSQSYQYQHQHHQNLVQHPVPRFFGTNLGDFKVLPSHQPESSSVTEEASSITTAATAATAATVTTMTPATPSSEAASYEETGERRRRYRGVRQRPWGKWAAEIRDPHKAARVWLGTFDTAEAAARAYDEAALRFRGNRAKLNFPENVRAVPRPIQPPFSAAAATTTATTHFRHPPPQMYHPEPPPPPPLVQQQQPQFQGNNEIRDYLEYSLLLQSSGDFQQHQQQQINQQPSNLLQQLYYNSQLAALQSSSSSSSSSSVVPPASVFSASAQPSSASLPLFPSQQMVFFRPPGNQPHGGGDGAGGLNFLPSTWSDTSGYPPPPG* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g3265 480 MobiDBLite consensus disorder prediction 115 170 - -
Ahy5g3265 480 MobiDBLite consensus disorder prediction 333 349 - -
Ahy5g3265 480 MobiDBLite consensus disorder prediction 223 250 - -
Ahy5g3265 480 CDD AP2 252 303 IPR001471 GO:0003700|GO:0006355
Ahy5g3265 480 MobiDBLite consensus disorder prediction 147 170 - -
Ahy5g3265 480 MobiDBLite consensus disorder prediction 442 480 - -
Ahy5g3265 480 SUPERFAMILY DNA-binding domain 244 302 IPR016177 GO:0003677
Ahy5g3265 480 MobiDBLite consensus disorder prediction 23 54 - -
Ahy5g3265 480 ProSiteProfiles AP2/ERF domain profile. 244 301 IPR001471 GO:0003700|GO:0006355
Ahy5g3265 480 PANTHER DNA-BINDING DOMAIN 71 441 IPR044808 GO:0003700|GO:0009873
Ahy5g3265 480 Pfam AP2 domain 244 293 IPR001471 GO:0003700|GO:0006355
Ahy5g3265 480 PRINTS Ethylene responsive element binding protein signature 245 256 IPR001471 GO:0003700|GO:0006355
Ahy5g3265 480 PRINTS Ethylene responsive element binding protein signature 267 283 IPR001471 GO:0003700|GO:0006355
Ahy5g3265 480 Gene3D AP2/ERF domain 243 303 IPR036955 GO:0003700|GO:0006355
Ahy5g3265 480 MobiDBLite consensus disorder prediction 319 353 - -
Ahy5g3265 480 SMART rav1_2 244 307 IPR001471 GO:0003700|GO:0006355
Ahy5g3265 480 MobiDBLite consensus disorder prediction 115 137 - -
Ahy5g3265 480 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF110 71 441 - -
Ahy5g3265 480 MobiDBLite consensus disorder prediction 24 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g3265 Ahy-Chr5 114756843 114759525 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g3265 183 313 AP2-EREBP Transcription Factor Family AT2G33710 49.618 9.46e-35 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Ahy5g3265 AP2 1.00E-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g3265 - - ahf:112803013 611.683