Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g3254 ATGATATTGTTTCAGGTGGGTATGGAATTTTGGGCTAGATGGGCACACAGAGCTCTCTGGCATGCTTCCTTGTGGCACATGCACGAGTCCCACCATAGACCAAGAGATGGACCCTTCGAATTGAACGATGTGTTTGCAATAATAAACGCTGTTCCTGCCATTGCTCTTCTCTCCTTCGGTTTCTTCCACAAAGGACTAGTCCCTGGCCTCTGCTTTGGTGCTGGTCTTGGAATCACAGTGTTTGGAATGGCTTACATGTTTGTGCACGATGGCTTGGTTCATAGGAGATTCCCTGTAGGTCCCATTGCCAATGTTCCCTACTTCAGAAGAGTTGCTGCTGCTCACAAACTTCACCATTCGGACAAATTCAATGGGGTGCCATATGGCCTCTTTTTGGGACCAAAGGAAATTGAAGAAGTGGGAGGGTTAGAAGAGCTTGAGAAAGAGATTAGTAGGAGAACAAAATCTTATAATAATAATAATAATAAAAATAGTTCATGA 501 0.4411 MILFQVGMEFWARWAHRALWHASLWHMHESHHRPRDGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGAGLGITVFGMAYMFVHDGLVHRRFPVGPIANVPYFRRVAAAHKLHHSDKFNGVPYGLFLGPKEIEEVGGLEELEKEISRRTKSYNNNNNKNSS* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g3254 166 Pfam Fatty acid hydroxylase 2 131 IPR006694 GO:0005506|GO:0008610|GO:0016491
Ahy5g3254 166 PANTHER BETA-CAROTENE 3-HYDROXYLASE 1, CHLOROPLASTIC 5 158 IPR045019 GO:0016491
Ahy5g3254 166 PANTHER HYDROXYLASE, PUTATIVE, EXPRESSED-RELATED 5 158 - -
Ahy5g3254 166 Coils Coil 143 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g3254 Ahy-Chr5 114584996 114586868 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g3254 73 164 Chloroplast and Mitochondria Gene Families AT5G52570 80.435 5.44e-43 141