Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g3252 ATGAGAAATCTTCATGTTTTGATAAAAAAATATATTTATTTTTCATTTATTCTTATTACCGCAAGCAAAATTATAACGCTACGAGAAGGAGGCTTGAAAAGAAAGAAGATGGAGATGGAGATGCTAAGTATGGAAGATACAGAGATAGCCACAGACATGACTCCATCCCTCGTCCCTCTCACTTTCTCTCTCCACCCCTCCAACCTCCACACTCACTGCTCCTCTTGTTTCTCTCTCCTCCCTCTCTCTCCCGTTCCCATCACCCCCTTCCTCTACTGCTCTCCTCCCTGCTCCGCCGCCCACGCTTTCCTCCTCCACCACCCCGCCGTCTCTCACTCCTCCGACCTCCGCGCCGCCCTCCTCCTCCTCTCCCACCACTGCCCCTCCGTCACTTCCTCTCGTGTCGCTGGCCTCCTCTCCAACCGCCACAAGCTCACGTGCCACCACAGCTCCGACGAAGACGAGGTTTCCGAGAGAATCAGCAGTGGAGTCAGAGCCTTGGCCACTGCAATTACGGAGCTGCGAGGGGAGCTGGAGCCGGACGACGCTGTTTTGGAGGAGGCGGAGTGTGCATTGTGCGCGGTGCTAACGAACGCCGTGGAGGTGCAGGATAAGGAAGGGCGCGCACTAGGAATCGCGGTTTATGGTCCGGCGTTCTCTTGGATCAACCACAGCTGCTCCCCCAATGCCTGCTACCGCTTCATCCTCTCTCCTCCTCCTTCTTCTTCTTCTTCGCAGGAATCCAAGCTTCGAATAGCTCCATCTTCCTTTCGCGGTTCTCCTGATTCACAAATAGATAGTGGGGTTTGTACTATCAGTAATCATTTTCAGAAAGAAGAGGAGCAAAACCAAGGCTATGGACCGAGATTGATTGTGAGGAGTATCAAGAGAATCAAAAAGAGACAAGAGATTACCATAGCATACACTGATCTCTTGCAATCTAAGGCAATGCGGCAATTGGATCTATGGTCCAAGTACAGGTTTATCTGCTGTTGCATGCGATGTAGTGTTGTGCCCTTCACATATGTTGATCATGCATTGCAAGATGTGGTCATCACAATCTGCAATTTTCCCAAAACATCTCAGGAAATTTCTGTTTCCGGTTGTGATTTTACTAGTTCAAGCTCCAACTACAATCTTCTCAGAGACACAGCAGAAAGAAGACTGAATGATTTAGTGGATGATATTATATCTGAATATCTCATGGTTGGTGATCCTGAGCCTTGCTGTGAGAAACTTGAGAAGATTCTTATGCAGGGTCTGTGCGACGAGTTGGACAATGTTGAAGAAACTCCACATTATAAGTTCATGTTGCATCCCCTGCATTACCTCTCTCTAAATGCATACACAACACTGGCTTCGGCATATAAAGTTCGTGCCAGTGATATCTTGTCTACAACTTCTACAATAGATCAAAACCAGTTAGAAGCTTTCAACATGAGCAGAACAAGTGCAGCATATTCCTTGTTACTAGCAACTACAGCACATCATCTCTTCAATTCTGAATCCTCACTGATTGCATCTCTTGCAAACTTTTGGACAGGTGCAGGCGAGTCTTTGTTGTATCTTGCCAGAAGCTCGGAATGGAGCAAGGTTTTCAAATCAAGTCTGGTTGCTTCTTCGGTTTCCAAGGTCAAATGTTCCAAGTGTTCATTAATGGATACATTTAGAGCCTATATGTGTAATGGTAGAATTAGGAATGATGATTTTGAGAATGCATCAAATGAGTTTCTTGATTGCATCTCACTTGATTCAACACAGAAGGTTTGGAGTTTCCTTGTCAATGGTTGCCGTTTTTTGAGATCGATCAAGGATCCTATGGATTCGGGCTGGTTAGTCTCTACCAGCGATTCCAGAGCAACGGATCCCAGAGCTCTGGCTAAGAAAAAATCTGAAATATGTGACTCACACGAATCTGGAAATAGTATCCAGACCTGTGAAGAACAAACTTGCAATGAGAATGCAAGGGTACACATTTTTGAGCTGGGTGTACACTGCTTAGCATATGGAGGATTATTGGCTGCTATATGTTATGGTCACCATTCCCATTTGGCTTCATATGTTGAAGAGATTCTGGATGACGAAAACAATCTTATATTATAA 2103 0.456 MRNLHVLIKKYIYFSFILITASKIITLREGGLKRKKMEMEMLSMEDTEIATDMTPSLVPLTFSLHPSNLHTHCSSCFSLLPLSPVPITPFLYCSPPCSAAHAFLLHHPAVSHSSDLRAALLLLSHHCPSVTSSRVAGLLSNRHKLTCHHSSDEDEVSERISSGVRALATAITELRGELEPDDAVLEEAECALCAVLTNAVEVQDKEGRALGIAVYGPAFSWINHSCSPNACYRFILSPPPSSSSSQESKLRIAPSSFRGSPDSQIDSGVCTISNHFQKEEEQNQGYGPRLIVRSIKRIKKRQEITIAYTDLLQSKAMRQLDLWSKYRFICCCMRCSVVPFTYVDHALQDVVITICNFPKTSQEISVSGCDFTSSSSNYNLLRDTAERRLNDLVDDIISEYLMVGDPEPCCEKLEKILMQGLCDELDNVEETPHYKFMLHPLHYLSLNAYTTLASAYKVRASDILSTTSTIDQNQLEAFNMSRTSAAYSLLLATTAHHLFNSESSLIASLANFWTGAGESLLYLARSSEWSKVFKSSLVASSVSKVKCSKCSLMDTFRAYMCNGRIRNDDFENASNEFLDCISLDSTQKVWSFLVNGCRFLRSIKDPMDSGWLVSTSDSRATDPRALAKKKSEICDSHESGNSIQTCEEQTCNENARVHIFELGVHCLAYGGLLAAICYGHHSHLASYVEEILDDENNLIL* 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g3252 700 CDD SET_SMYD 177 335 - -
Ahy5g3252 700 PANTHER PROTEIN SET DOMAIN GROUP 41 39 696 - -
Ahy5g3252 700 SUPERFAMILY SET domain 211 332 IPR046341 -
Ahy5g3252 700 Gene3D SET domain 166 337 IPR046341 -
Ahy5g3252 700 MobiDBLite consensus disorder prediction 240 265 - -
Ahy5g3252 700 Pfam SET domain 203 308 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g3252 Ahy-Chr5 114558185 114562242 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Ahy5g3252 SET 1.40E-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g3252 - - ahf:112802999 1332.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g3668 15 159511552 159515905 Ahy5g3252 5 114558185 114562242 hybridization