Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g3244 ATGATAATGGTCGAACCATCATCATCATCGTCATCTTCTTCTTCCTTCACATGGAATTGGATCTACGACGTTTTCCTCAGTTTCAGAGGAGAAGATACTAGAAACGGTTTCACCAGTAATCTCTACCATGCACTGGATCAAAAGGGGATCCACACCTTCATTGATGATGAGGAGCTTCAAAAGGGGGAAGAAATTACTCCAGCACTTGTGAAGGCTATTCAAGAATCTAGGATCGCCATCGTTGTGTTCTCTAAGAACTATGCATCATCTGCTTTCTGTTTGGACGAGCTAGCAAAGATTCTTGAGCTGTTGAAACTTGAAGGAAGATTGGTTTGGCCAATCTTTTATGATGTGGATCCATCAGATGTTCGCCATCAGAAAGGTAGCTATGCGGGGGCATTAGCAAAACATGAAGAACGGTTCCAGAATGATGACAATGGCAAGGTACAAAAATGGAGGAATGCTCTACGTGAAGCAGCTAATTTGTCCGGTTCACATTTCAAACCAGGATCTTTGATGAAGATTGACAAGAATAATAATTGTGTGAGAATGCATGATTTGATTCAAGATATGGGTAGAGAAATTGTTAGAAGGGAATCAACTTCTAAGCCTGGCAAACGTTCTAGACTATGGAATGATGAGGACATTGTTCATGTTCTAGAAAATGACATGGGAAGTGATAGAGTTGAAGTCATAATTTTGCACTCAAGCAAGCGTAGAGTGAATTGGAATGGAAAAGCATTCAAGAAAATGAGGAATCTCAAAGTTCTCATATTCTGGGATGTACATTTTTCAGTTGGTCCTGATCATCTGCCAAACAGTTTAAGAGTGTTGGAGTGGGATGGATATCCATCACCATCATTACCCTCTGATTTTCATCCCACTAAACTCTTCATGCTCAATTTGTGCAACAGTTCTCTCAAATTGGACAATCCACTCCAGGCATGCATCATTTCCTACTATTTTACTCAATCAAATATGCTTATTCATTTAACAATTCTCTGTATAAAAATAAGCATTAGTTGTTATGAAAAGATTAGTATAAAACTAATATATAATAATAACTGA 1068 0.383 MIMVEPSSSSSSSSSFTWNWIYDVFLSFRGEDTRNGFTSNLYHALDQKGIHTFIDDEELQKGEEITPALVKAIQESRIAIVVFSKNYASSAFCLDELAKILELLKLEGRLVWPIFYDVDPSDVRHQKGSYAGALAKHEERFQNDDNGKVQKWRNALREAANLSGSHFKPGSLMKIDKNNNCVRMHDLIQDMGREIVRRESTSKPGKRSRLWNDEDIVHVLENDMGSDRVEVIILHSSKRRVNWNGKAFKKMRNLKVLIFWDVHFSVGPDHLPNSLRVLEWDGYPSPSLPSDFHPTKLFMLNLCNSSLKLDNPLQACIISYYFTQSNMLIHLTILCIKISISCYEKISIKLIYNNN* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g3244 355 Gene3D - 16 201 IPR035897 -
Ahy5g3244 355 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 171 320 IPR044974 GO:0006952
Ahy5g3244 355 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) 171 320 - -
Ahy5g3244 355 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) 24 171 - -
Ahy5g3244 355 SUPERFAMILY L domain-like 241 335 - -
Ahy5g3244 355 ProSiteProfiles TIR domain profile. 20 186 IPR000157 GO:0007165
Ahy5g3244 355 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 24 171 IPR044974 GO:0006952
Ahy5g3244 355 Pfam TIR domain 22 202 IPR000157 GO:0007165
Ahy5g3244 355 SMART till_3 21 162 IPR000157 GO:0007165
Ahy5g3244 355 SUPERFAMILY Toll/Interleukin receptor TIR domain 11 164 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g3244 Ahy-Chr5 114479812 114481537 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g3244 171 308 WRKY Transcription Factor Family AT4G12020 42.466 2.04e-25 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g3244 - - ahf:112802991 709.138