Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g3239 ATGCTGGGGGACTCAGCTGTTTTGGGAACAGGAGGAGGCAGCTCTGGAGGAGCAGATGCAGTAGTCGCAACAGCCGCGACTTCTTCTGCTGCGGCTGCTGTAGCTACTGCATCAGCACCACTACCACCACCACAGTCAGTATCAGCAGTACCGCATCATCATCATGACGGTACTGCTGAAATGGTTGGTGGTGGTGGAGGGGGAGGTGGAGGATCAACCTCCGGGGACGACGAGAAAGGAGAGAGGAGCTTCGGCGGGAACAGGTGGCCGAGACAAGAGACTTTGGCTTTGCTCAAAATACGGTCGGATATGGACGTGGCGTTTCGTGATGCCAGTGTTAAGGGTCCTTTGTGGGAAGAGGTTTCAAGGAAGCTAGCAGAGCTTGGATACAAGAGAAACGCGAAGAAATGCAAAGAGAAATTTGAGAATGTGTACAAGTACCACAAGAGAACGAAAGATGGTAGAAGTGGAAAATCTGAAGGAAAAACATATAGGTTCTTTGATCAATTAGAGGCACTTGAAAACAACCCAATTATTCATTCCCCAGCATTACCTCAAAAATCAGCATTGCAAGCAACACCAGTTTCAATGGTAAAAACAACCGCATCATTGCCATCCCCTCCAATAATTACAACAATGCCACAACAACAACAGGTAGTAGTAGCAAGTAGTGGCACCAACACAACATCAGCACCACCTATTAGTATTGCTACTGTTCCATCAATAGCTCCTACTACTATTTCAATGCCTCAAATTCAACCCAATAATAGTAATAATAATAATAGTAGTAATAATAATAATAATAATCCTGTATATTTTCCTCCACCACCACCACCACCGCCACCTGCTTCATCTTTTCCGAGTATTCCGGCGGAGCTACTCTCGAATTCGAGTTCTTCTTCGACTTCGTCGGAGGAGACGATCGAAGGAGGGAGTAGGCGGAACAAGAGGAAGAGAAGGTGGAAGGAGTTCTTTGAGAAGCTAATGAAGGAGGTGATAGAGAAGCAGGAGGATCTGCAGAAGAGGTTCCTTGAAGCAATAGAGAAGAGGGAGAAAGAGAGATCCGCTAGAGAAGAAGCATGGAGAGTTCAGGAATTACAAAGAATCAATAAAGAGAGAGAGATTCTCGCTCAAGAGAGGTCCATCGCCGCCGCCAAAGACCAAGCCGTCATGACCTTCTTGCACAAAATTGCCGACCAACAAAACCTTCCTACACCACCATTCAACAATGTTTCTCAACCATCACCACCGCCACCACCGCCTCCTCCACCACCACCGCCACCACAACAAACACAACCTACCCCGCCGGTGGTGGTGCCGCCATTACCCACACCACCACGGCCGCCACCAAGCATGGAGATGGTGAAAGTTGTTGATAACAACAACAACAATGGAGAGAATAACAATAACAACAATAATAATAATTCGTCACCGCTGGCGGCGAGTTCTTCTCGGTGGCCGAAAGCTGAAGTTGAGGCGCTGATAAACCTGAGAACAAGCCTTGATGCGAAGTACCAAGAGAATGGACCAAAAGGACCATTGTGGGAAGAGATTTCAGCGTTGATGAAGAAGCATGGTTATAACAGGAACGCTAAGAGGTGCAAGGAGAAGTGGGAGAACATCAACAAGTACTTCAAGAAAGTCAAAGAGAGTAACAAGAAGAGGCCTCAAGATTCAAAGACTTGTCCCTATTTTCACCAGCTTGATGCTCTTTACAGGGAGAGGAATAGCGGCAAGCATGACGCTGCTCCCGCCATTGTCACTACAACGCCGTTAATGGTAAGGCCGGAGCAGCAGTGGCCTCCTCAGACGGACCAGCCCTCCTCGCAGCCGCGGGAAGTAACCATGGAAGACGCTCGGAAGGGAGGCAATGATGAGGACGAGGACGAGGAGAAGGATAATATTGGTGATGAAGATGACGACGAGGACGATGACGACGACGAAGGTGGTAGTAACTTTGAGATTGTGGCAAGCAAGCCAGTTTCTGCTGAGTGA 1995 0.4812 MLGDSAVLGTGGGSSGGADAVVATAATSSAAAAVATASAPLPPPQSVSAVPHHHHDGTAEMVGGGGGGGGGSTSGDDEKGERSFGGNRWPRQETLALLKIRSDMDVAFRDASVKGPLWEEVSRKLAELGYKRNAKKCKEKFENVYKYHKRTKDGRSGKSEGKTYRFFDQLEALENNPIIHSPALPQKSALQATPVSMVKTTASLPSPPIITTMPQQQQVVVASSGTNTTSAPPISIATVPSIAPTTISMPQIQPNNSNNNNSSNNNNNNPVYFPPPPPPPPPASSFPSIPAELLSNSSSSSTSSEETIEGGSRRNKRKRRWKEFFEKLMKEVIEKQEDLQKRFLEAIEKREKERSAREEAWRVQELQRINKEREILAQERSIAAAKDQAVMTFLHKIADQQNLPTPPFNNVSQPSPPPPPPPPPPPPPQQTQPTPPVVVPPLPTPPRPPPSMEMVKVVDNNNNNGENNNNNNNNNSSPLAASSSRWPKAEVEALINLRTSLDAKYQENGPKGPLWEEISALMKKHGYNRNAKRCKEKWENINKYFKKVKESNKKRPQDSKTCPYFHQLDALYRERNSGKHDAAPAIVTTTPLMVRPEQQWPPQTDQPSSQPREVTMEDARKGGNDEDEDEEKDNIGDEDDDEDDDDDEGGSNFEIVASKPVSAE* 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g3239 664 MobiDBLite consensus disorder prediction 456 483 - -
Ahy5g3239 664 Coils Coil 322 349 - -
Ahy5g3239 664 SUPERFAMILY Formin homology 2 domain (FH2 domain) 418 549 - -
Ahy5g3239 664 Pfam Myb/SANT-like DNA-binding domain 484 571 IPR044822 -
Ahy5g3239 664 Pfam Myb/SANT-like DNA-binding domain 87 173 IPR044822 -
Ahy5g3239 664 MobiDBLite consensus disorder prediction 401 485 - -
Ahy5g3239 664 MobiDBLite consensus disorder prediction 247 269 - -
Ahy5g3239 664 MobiDBLite consensus disorder prediction 590 664 - -
Ahy5g3239 664 SMART sant 482 544 IPR001005 -
Ahy5g3239 664 SMART sant 85 147 IPR001005 -
Ahy5g3239 664 MobiDBLite consensus disorder prediction 32 88 - -
Ahy5g3239 664 MobiDBLite consensus disorder prediction 592 613 - -
Ahy5g3239 664 MobiDBLite consensus disorder prediction 409 452 - -
Ahy5g3239 664 ProSiteProfiles Myb-like domain profile. 484 542 IPR001005 -
Ahy5g3239 664 MobiDBLite consensus disorder prediction 628 651 - -
Ahy5g3239 664 Gene3D - 486 547 - -
Ahy5g3239 664 Gene3D - 89 150 - -
Ahy5g3239 664 MobiDBLite consensus disorder prediction 247 317 - -
Ahy5g3239 664 CDD GT1 484 549 - -
Ahy5g3239 664 MobiDBLite consensus disorder prediction 289 308 - -
Ahy5g3239 664 CDD GT1 87 152 - -
Ahy5g3239 664 ProSiteProfiles Myb-like domain profile. 87 145 IPR001005 -
Ahy5g3239 664 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 35 658 - -
Ahy5g3239 664 MobiDBLite consensus disorder prediction 270 287 - -
Ahy5g3239 664 PANTHER - 35 658 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g3239 Ahy-Chr5 114384639 114388103 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g3239 77 610 Trihelix Transcription Factor Family AT1G76880 50.176 1.75e-153 455
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Ahy5g3239 Myb_DNA-bind_4 4.00E-22 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g3239 - - gmx:100804788 577.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g3658 15 159398126 159401439 Ahy5g3239 5 114384639 114388103 hybridization
Ahy5g3239 5 114384639 114388103 Ahy19g2813 19 150149455 150152687 PCT
Ahy5g3239 5 114384639 114388103 Ahy9g2783 9 116855457 116858653 PCT
Ahy19g2813 19 150149455 150152687 Ahy5g3239 5 114384639 114388103 PCT
Ahy9g2783 9 116855457 116858653 Ahy5g3239 5 114384639 114388103 PCT