Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g3238 ATGGAAGGGAATTTGCCACAGGGTGGTACTGTTCAAGGTGGAGCTTCTTTTGGTGGTTTTGATTTGCCTGCTTCAATGCGGCTTCATCATCAATCACAGCATGCGCCGCATACCATGACCCAGCATCAAAATCATCCTTGCCACGGGTCTTCGGGGAAGTCCTCGAATTTTCCACTCACAATGGGAACCATGTGTGATCAGACTATGTCAATGGCTGAGTTTGTTAAGGGAGATAGAAACAAAAACTCATTAAGTGATGAAGAAGAGCCGAGTTTGACTGAAGATGGTGGTGAGGGTCATCATGAAGCAGGCAGAACGAAGAAGGGGTCGCCTTGGCAACGGATCAAGTGGACCGATAAGATGGTGAAGCTTATGATAACAGCTGTTTCATATATAGGCGAGGATTCGTCTTCTGATGGTGCCGGAAGAAGAAAATTCATGGTCCTTCAAAAAAAGGGCAAATGGAAGACTATTTCCAAGGCCATGGCTGAAAGAGGTTATCATGTTTCCCCTCAGCAATGTGAGGATAAATTCAATGATCTCAATAAACGCTATAAAAGGCTTAACGAAATGCTTGGCAGGGGTACTTCTTGTCAGGTTGTTGAAAATCCAACGCTGTTGGATGTAATTGACTATCTTTCTGAGAAAGAAAAGGATGATGTTCGGAAAATACTAAACTCAAAACAGCTTTTTTATGAGGAGATGTGTTCTTACCATAATAATAATAGATTGCATTTACCCCATGACATTGCATTGCAACGATCGCTGCAGCTAGCTCTCCGAAGTAGAGATGGTCATGACGAAGATGATCAAGACATGGAAACTGATGATCATGATGAATTTGAAGAGAATCATGCTTCCCATGGGGATTGCAGAGGAATCCACGGGGCATTAGTCGGACCTATGAAGAAATTAAAACAAGGACAAGGACAAGGCCAAGAAGATTCTTCTGCTTTTGGGAATTCTCTAAATTGTCAAGAATATAACAAAAGTTTGCACACTCATGGACAGATGGTCCAATCAGATGTAAATCAAGCTTTACCTGAAAACTTGAGAGCAGCATGGTTACAGAAGCAATGGGTTGAGTCTCGCGCAATTCAGTTAGAAGAACAGAAATTACAGATACAGATTGAGATGTTGGAAGTAGAGAAGCAGAGATTCAAGTGGCAGAAGTTCAGTAAGAAGAAAGATCGGGAGTTGGAGAAGTTGAAGCTGGAAAATGAAAGGATGAAGCTTGAGAACGAACGTCTTGCTTTAGAGCTGAAGCGAAAGGAATTGGTTTCTGGTTTGAACTAG 1296 0.4221 MEGNLPQGGTVQGGASFGGFDLPASMRLHHQSQHAPHTMTQHQNHPCHGSSGKSSNFPLTMGTMCDQTMSMAEFVKGDRNKNSLSDEEEPSLTEDGGEGHHEAGRTKKGSPWQRIKWTDKMVKLMITAVSYIGEDSSSDGAGRRKFMVLQKKGKWKTISKAMAERGYHVSPQQCEDKFNDLNKRYKRLNEMLGRGTSCQVVENPTLLDVIDYLSEKEKDDVRKILNSKQLFYEEMCSYHNNNRLHLPHDIALQRSLQLALRSRDGHDEDDQDMETDDHDEFEENHASHGDCRGIHGALVGPMKKLKQGQGQGQEDSSAFGNSLNCQEYNKSLHTHGQMVQSDVNQALPENLRAAWLQKQWVESRAIQLEEQKLQIQIEMLEVEKQRFKWQKFSKKKDRELEKLKLENERMKLENERLALELKRKELVSGLN* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g3238 431 MobiDBLite consensus disorder prediction 1 62 - -
Ahy5g3238 431 Gene3D - 117 187 - -
Ahy5g3238 431 Coils Coil 393 427 - -
Ahy5g3238 431 PANTHER FACTOR, PUTATIVE-RELATED 1 430 - -
Ahy5g3238 431 MobiDBLite consensus disorder prediction 31 62 - -
Ahy5g3238 431 MobiDBLite consensus disorder prediction 78 112 - -
Ahy5g3238 431 Pfam Myb/SANT-like DNA-binding domain 116 238 IPR044822 -
Ahy5g3238 431 MobiDBLite consensus disorder prediction 79 112 - -
Ahy5g3238 431 PANTHER F16F4.11 PROTEIN-RELATED 1 430 - -
Ahy5g3238 431 Coils Coil 363 385 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g3238 Ahy-Chr5 114366189 114368419 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Ahy5g3238 Myb_DNA-bind_4 1.20E-23 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g3238 - - gmx:100812134 621.313
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g3657 15 159378632 159381331 Ahy5g3238 5 114366189 114368419 hybridization
Ahy5g3238 5 114366189 114368419 Ahy19g2814 19 150181415 150184240 PCT
Ahy5g3238 5 114366189 114368419 Ahy9g2782 9 116825001 116827176 PCT
Ahy19g2814 19 150181415 150184240 Ahy5g3238 5 114366189 114368419 PCT
Ahy9g2782 9 116825001 116827176 Ahy5g3238 5 114366189 114368419 PCT