Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g3232 ATGATTTGTAACTTTAAAAAAGAGGCTTCCCTCAATCACACCAACAAACAAGTCTTTCATAGCAACAACAACAATGACCTTGAGCAACAAGCAACAACAACAACACCACTTGAGATCATTGAAACCAAGAAGGAGGAAGAAGAAGAAGAAGATTTCTTTGACTACTCAAGAAGATCTCAATGGCTACGTGCTGCGGTTCTTGGAGCCAATGATGGGTTGGTCTCAACAGCATCACTAATGATGGGTGTTGGAGCAGTGAAACAAGACATCAAAGCCATGATCCTCACCGGTTTTGCAGGCTTAGTTGCCGGCGCTTGCAGCATGGCCATAGGTGAGTTTGTGTCTGTCTACTCGCAACTCGACGTTGAACTCGCTCAAATGAAGAGGGACAAAGAAAGAGGAAACAATAACAACAACAATTCTGACGAAGAAGAAGAAGAAGAAAGATTGCCAAACCCTTTACAAGCAGCAGCAGCATCAGCTTTGGCATTTTCTATTGGTGCAATGGTGCCATTGCTTTCTGCTTCTTTCATAAGAGAATATAAGGTGAGGCTTGGTGTGGTTGTGGCTGCTGTAACCTTTGCTTTGGTTCTGTTTGGTTGGTTAGGTGCTGTTCTTGGTAAGGTTCCTGTTTTTAGGTCTTCTTTAAGGGTTCTTCTTGGTGGTTGGATGGCCATGGCTATTACTTTTGCTCTTACCAAGTTGATAGGATCAAGTGCTCTTTAA 726 0.4298 MICNFKKEASLNHTNKQVFHSNNNNDLEQQATTTTPLEIIETKKEEEEEEDFFDYSRRSQWLRAAVLGANDGLVSTASLMMGVGAVKQDIKAMILTGFAGLVAGACSMAIGEFVSVYSQLDVELAQMKRDKERGNNNNNNSDEEEEEERLPNPLQAAAASALAFSIGAMVPLLSASFIREYKVRLGVVVAAVTFALVLFGWLGAVLGKVPVFRSSLRVLLGGWMAMAITFALTKLIGSSAL* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g3232 241 MobiDBLite consensus disorder prediction 128 150 - -
Ahy5g3232 241 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 27 238 IPR008217 GO:0005384|GO:0030026
Ahy5g3232 241 PANTHER VACUOLAR IRON TRANSPORTER HOMOLOG 2.1 27 238 - -
Ahy5g3232 241 Coils Coil 117 144 - -
Ahy5g3232 241 Pfam VIT family 62 145 IPR008217 GO:0005384|GO:0030026
Ahy5g3232 241 Pfam VIT family 146 233 IPR008217 GO:0005384|GO:0030026
Ahy5g3232 241 CDD Nodulin-21 60 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g3232 Ahy-Chr5 114334991 114337519 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g3232 46 241 Nodulin-like Gene Family AT3G43660 69.898 7.24e-101 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g3232 K22736 - gmx:100807991 310.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g3651 15 159347194 159350258 Ahy5g3232 5 114334991 114337519 hybridization
Ahy5g3232 5 114334991 114337519 Ahy19g2817 19 150214882 150216045 PCT
Ahy5g3232 5 114334991 114337519 Ahy9g2779 9 116801059 116802050 PCT
Ahy19g2817 19 150214882 150216045 Ahy5g3232 5 114334991 114337519 PCT
Ahy9g2779 9 116801059 116802050 Ahy5g3232 5 114334991 114337519 PCT