Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g3231 ATGGACCCGAAGTTCATGGGAAAGCCACCTCCGGCCACCACCGTAGAGATAGAACGCATGCCGGAGCGAGGCTCCCACCACCGCCGCTCCCACTCCGACACCTCTTTCCGCTTCGCCGGAAACTTCGACGACCTCCTCCTCTTCGACCCTTCCGACCTCGACATCTCCAACCTCCCTTCTCCTCTTCCACTTCCGACCCCCGCCACCGCAAGCGGCGGAATCCCCATGGCTATCGATTCCGATGAGTCTAGCGGTCAGAGCGGGATGGGAAGAGCCGGTGGCGGTGCTCCGATCGGGCACCTACGGAGCTTGTCAGTCGACTCGGACTTCTTCGATGGCTTCGGGTTCGGCGGCGCCGGAGAGGAGAAGTCAGGCGGGAAAAGTGGCGGTGGAGGAGGAGAGAGAAGAGTTGGGCATCACCGGCATAGTAATTCGATGGATGGATCATCAACGACTTCGTTTGAAGCTGAGTCATCGATGATGGATGGTGTGAAGAAAGCCATGGCACCTGATAAGCTCGCTGAGCTTGCTCTTATTGACCCTAAGCGAGCCAAGAGGATTCTTGCGAATAGACAATCAGCTGCAAGATCAAAGGAGAGAAAGATTCGGTACACAAGTGAGCTTGAGAAGAAGGTGCAGACTCTTCAGACCGAAGCAACTAACCTCTCTGCTCAACTTACCATGCTCCAGAGAGACACGACAGATTTAACTGCGGAGAATAAGGAGCTCAAACTGCGGTTGGAGGCTATGGAACAAGAAGCACAGCTTAGAGAAGATCTCAATTCGGCATTGAAGGAAGAATTGCAGCGCCTTAGGGAACAGAGTAACCGCTTGGGTGCTATGAGTGGTGGTAACCATAATTTTGGTGGTATGTTCTCTCAATTGGCTTCTCAATTAGCCATGCAACAGCTGAGTAATCATCCTCCGCCGCAACAGCAGCAGGTCGGCGTGCCTCCTCATCCCTCTGATCAGCCTTTCCAAGGGCAGCACGGGCAGCGACGCCCGAGCTTCATGGACTTCAATCAGAAGAAGTAG 1035 0.5449 MDPKFMGKPPPATTVEIERMPERGSHHRRSHSDTSFRFAGNFDDLLLFDPSDLDISNLPSPLPLPTPATASGGIPMAIDSDESSGQSGMGRAGGGAPIGHLRSLSVDSDFFDGFGFGGAGEEKSGGKSGGGGGERRVGHHRHSNSMDGSSTTSFEAESSMMDGVKKAMAPDKLAELALIDPKRAKRILANRQSAARSKERKIRYTSELEKKVQTLQTEATNLSAQLTMLQRDTTDLTAENKELKLRLEAMEQEAQLREDLNSALKEELQRLREQSNRLGAMSGGNHNFGGMFSQLASQLAMQQLSNHPPPQQQQVGVPPHPSDQPFQGQHGQRRPSFMDFNQKK* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g3231 344 Coils Coil 205 281 - -
Ahy5g3231 344 MobiDBLite consensus disorder prediction 117 158 - -
Ahy5g3231 344 MobiDBLite consensus disorder prediction 302 336 - -
Ahy5g3231 344 MobiDBLite consensus disorder prediction 144 158 - -
Ahy5g3231 344 SMART brlzneu 178 242 IPR004827 GO:0003700|GO:0006355
Ahy5g3231 344 Pfam bZIP transcription factor 182 240 IPR004827 GO:0003700|GO:0006355
Ahy5g3231 344 SUPERFAMILY Leucine zipper domain 182 234 IPR046347 GO:0003700|GO:0006355
Ahy5g3231 344 MobiDBLite consensus disorder prediction 64 96 - -
Ahy5g3231 344 MobiDBLite consensus disorder prediction 1 36 - -
Ahy5g3231 344 CDD bZIP_plant_RF2 183 232 IPR044759 GO:0003700|GO:0006355
Ahy5g3231 344 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 180 243 IPR004827 GO:0003700|GO:0006355
Ahy5g3231 344 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 8 340 - -
Ahy5g3231 344 MobiDBLite consensus disorder prediction 19 34 - -
Ahy5g3231 344 PANTHER BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN-RELATED 8 340 - -
Ahy5g3231 344 MobiDBLite consensus disorder prediction 302 344 - -
Ahy5g3231 344 Gene3D - 181 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g3231 Ahy-Chr5 114316284 114319132 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g3231 7 326 bZIP Transcription Factor Family AT1G43700 48.148 1.62e-77 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Ahy5g3231 bZIP_1 1.80E-07 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g3231 K20557 - gmx:778142 410.609
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g3650 15 159335280 159338049 Ahy5g3231 5 114316284 114319132 hybridization