Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g3222 ATGGACGAACCACTGAGGCCTCTCAACGGCATGCCACCCCTTTCCCAACCACCTCCCAACAACCCCAGAACCAAGCAGACCTCGCGAGACACCAGCACTACCCCCACTGCCGGACCCATGAGGTACCGCGGCGTCAGGCGGAGGCCATGGGGCCGTTATGCCGCCGAGATAAGGGACCCTCAGTCCAAGGAGCGCCGTTGGCTGGGGACTTTCGACACTGCGGAGGAAGCCGCCTGCGCCTACGACTGCGCCGCCAGAGCCATGCGTGGCCATAAGGCAACCACCAACTTCGTGTACCATACTTTACCTTCTTACTCTTCTTCCATCACCATCACCAACAACCATAGCAATCTCCTTAACTGCCATAACCACTTCAGCTTCCCTTATCATCATAACCAACTCTTCAACGGTCATAAACGCCACTTCGGGGTTTGGTCTGACCCTTTCTCTGCTTCAACCTTCCAGGAACAGCGAAACCTTGACTCCATCAACATGCTTCTCCACCGAGACTTGGTAGCCTCTTCTTCCTCCGGCAATTTATCCTACAACATGGGCAGTTTTGTCAATTCACATCCTGGCAATGTTGCTAATAACTACTCCGCCGCACCTTGTTCTGACACAAGCAATCTCGGTTGTGACGGTGGACGCAATAAGACCGATAATACTAACAATAATGAAGCTGACGATGGTGGCGAAGAAGACTCAAAGGAGCAATTCTATGAAGGTTCAGGGTCGTCAGGGTTGTTGGAAGAAATAGTTAAGGGTTTCTTGAAGAAAAAGCCAAAGCCCAATAAATGTGAGAGATTGTTAGGTACCAGGACCACTGCTTCAGACGGTTCTTGCCACTCACCATTTCCTCCTCCTCCTCCTCTGGTTGTTTTCCGCGAGGAGTCGAAGAAAGACGATGGTTTCGGCGTTCATTTGGATCAACAGGGTTTCCAATACATGCAGCAGCTTGGTGGTGGTTTCAATAATGGTTTTAGCAATATGGTTATGCTGCCTAACATGATGATGAATAACGATAATGAAGTAGAGTGCTCGATCGTAGAAAACCTTTTTCCGGATGCATAA 1071 0.5014 MDEPLRPLNGMPPLSQPPPNNPRTKQTSRDTSTTPTAGPMRYRGVRRRPWGRYAAEIRDPQSKERRWLGTFDTAEEAACAYDCAARAMRGHKATTNFVYHTLPSYSSSITITNNHSNLLNCHNHFSFPYHHNQLFNGHKRHFGVWSDPFSASTFQEQRNLDSINMLLHRDLVASSSSGNLSYNMGSFVNSHPGNVANNYSAAPCSDTSNLGCDGGRNKTDNTNNNEADDGGEEDSKEQFYEGSGSSGLLEEIVKGFLKKKPKPNKCERLLGTRTTASDGSCHSPFPPPPPLVVFREESKKDDGFGVHLDQQGFQYMQQLGGGFNNGFSNMVMLPNMMMNNDNEVECSIVENLFPDA* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g3222 356 Pfam AP2 domain 41 91 IPR001471 GO:0003700|GO:0006355
Ahy5g3222 356 ProSiteProfiles AP2/ERF domain profile. 41 98 IPR001471 GO:0003700|GO:0006355
Ahy5g3222 356 CDD AP2 41 97 IPR001471 GO:0003700|GO:0006355
Ahy5g3222 356 Gene3D AP2/ERF domain 40 99 IPR036955 GO:0003700|GO:0006355
Ahy5g3222 356 PRINTS Ethylene responsive element binding protein signature 42 53 IPR001471 GO:0003700|GO:0006355
Ahy5g3222 356 PRINTS Ethylene responsive element binding protein signature 64 80 IPR001471 GO:0003700|GO:0006355
Ahy5g3222 356 SUPERFAMILY DNA-binding domain 41 99 IPR016177 GO:0003677
Ahy5g3222 356 SMART rav1_2 41 104 IPR001471 GO:0003700|GO:0006355
Ahy5g3222 356 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 33 349 - -
Ahy5g3222 356 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ESR2-LIKE 33 349 - -
Ahy5g3222 356 MobiDBLite consensus disorder prediction 21 38 - -
Ahy5g3222 356 MobiDBLite consensus disorder prediction 210 243 - -
Ahy5g3222 356 MobiDBLite consensus disorder prediction 1 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g3222 Ahy-Chr5 114194319 114195389 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g3222 40 263 AP2-EREBP Transcription Factor Family AT1G24590 43.556 1.17e-36 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Ahy5g3222 AP2 1.70E-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g3222 - - aip:107641556 587.8