Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g3212 ATGGATGATTTTTGGAGCCTGATTTGTATGGACTATGATTGTTCCAAGGCCAGAGAAACTCCTTTCTGTAATGATTTCAAGTTCTTGCAAGATCATTCCAAATGCATCAACAATTTGTTGATCATTTGCTTTGATATCTTGCTGCTGATCATGCTGTCATTCACTATGATCAAGAGGACTTCATCAACTCCATTTCATGGCCAAACGCGAGCCGAAAGATATTCAAATTTGCAGCTGGTTTCTGCCACAAGCAATGGAGTTCTTGGCTTGGTGCATTCATGCTTAGGAATTTGGATTTTGGAGGAGATGATAAGAAAAAACCACACTGCATTGCCTCTTAATTGGTGGTTGGTAGAATTCTTTCAAGGAATCACATGGCTTTTAGCATCCTTCACAGTATTAAGTCTTCGGCTTAAACATTATCCGGTAACATCATTGCGCCTTTTCGCTGTTCTTCTACTTTTAGCTTCTAGCATACTATGTTCTTTGTCCTTGTTCTATGCAATTAGCAGCAGAGGACTCTCCCTGAAGATAGCTCTAGATGTTCTATCTTTTCCAGCATCAATCTTAGTGCTGTTATGCACATTCAAAGTATGTCATTGCGACGAAAAATGGAAGGAAAAGGATGAAAGCCTTTATGCTCCTTTGAATGGACAGATGAATGAAACTGATTCTGTTGGTGATATAGTCACACCATTCGCAAAAGCTGGATTCTTCAGCAGGATGACATTTTGGTGGTTGAATCCATTGATGAAAAAAGGTAAAGAGAAAACACTTGAGGATGAGGATATCCCAAAGCTGCGCGAGCCGGATCGAGCAGAAAGTTGCTATTCTGTGTTTATAGAACAACTTAACAAACAGAAACAAAAAGAACCAACACTGCAGCCATCAGTATTTTGGACTATAATGTCCTGCCACTGGAGAGAGATTTGGATTTCAGGATTCTTTGCATTTATTAAGGTAGTTACTCTGTCTTGTGGTCCCCTGCTTTTGAATGCATTTATATTGGTTGCTGAGGGTAATGAAAGTTTCAAATATGAAGGTTATGTGTTGGCCATTTCACTTTTCTTTGCAAAGATCATAGAATCCTTGTCTCAAAGGCAATGGTATTTTCGATGTAGACTCGTTGGTATGAAGGTTAGATCACTTCTCACTGCAGCCATCTATAAGAAACAATTGAAGCTATCCAATGCTGCTAGATTGGAGCATTCTGGTGGTGAGATAATGAATTATGTGACTGTTGATGCATATAGGATTGGAGAATTTCCATTTTGGTTTCATCAGATGTGGACAACAAGCTTCCAAATATGCATTGCTTTGGTGATTCTTGTCCGAGCCATTGGAGTCGCGACAATAGCCTCAATGGTAGTAATAATTCTCACTGTACTTTGCAATGCTCCATTGGCAAAGCTACAGCAGAAGTTTCAAAGCAAGCTCATGGTGGCACAAGATGAGAGATTGAAGGCTAATTCTGAGGCTCTTGTGAATATGAAAGTTCTGAAGCTATATGCATGGGAGAAACATTTTAAGAAGGCTATTGAAGGCTTAAGGAATGTGGAACTTGAAATGTTATCAGCAGTGCAATCAAGAAAGGCCTACAACATCTTTCTCTTTTGGTCTTCGCCTATTCTGGTGTCCGCGGCTTCCTTTGCTGCATGCTACTTCTTGGAGATTCCTTTGCATGCAAACAATGTCTTCACTTTTGTGGCAACACTGCGCCTTGTGCAAGAGCCAATCACAACCATCCCAGATGTTATTGGAGTGGTTATTCAATCGAAAGTTGCATTCGCTCGAATTGGGAAGTTTCTTGAGGCATCTGAACTGCAGAATGCAAATTGCAGGAAGAGTTGTGTTGATGATAACCTCAGAGGCTCAATTTCAACCAAGTCTGCTGATTTTTCATGGGAAGATAATGTGTCAAAACCAACACTTAGAAACATAAATTTGGAGGTTAGACATGGACAAAAGGTAGCAATTTGTGGAGAAGTTGGATCAGGAAAATCAACTCTCTTAGCAACAATTCTTGGAGAAGTTCCAAATACAAAGGGAACTATTGAAGTTTATGGGAGTTTTGCATATGTTTCTCAAACAGCATGGATACAGTCAGGTACAATAAAGGAAAATATTTTGTTTGGAGCAGATTTGGATCCACAAAGATATGAAGAGACACTTTATAGGTCTTCACTGATAAAGGATCTTGAGTTGTTTCCCTATGGAGATCTTACCGAAATAGGCGAGAGGGGAGTTAACCTGAGTGGAGGTCAGAAGCAGCGAATTCAGCTCGCTCGTGCGCTTTATCAGAATGCTGATATATATCTCTTGGATGATCCATTCAGTGCTGTTGATGCTCACACAGCCACAAATTTGTTTAAGGAATATATCATGGAAGGACTTGCAGGGAAGACTGTGTTACTTGTGACTCATCAAGTTGACTTCCTACCAGCTTTTGATTCTGTTATGTTGATGTTAGATGGAGAAATTCTACAAGCTGCTCCTTATCATCATCTATTGGAATCAAGCCGAGAATTCCAAGAACTCGTCGAGGCTCACAAGAAGACTGCTGGTTCTGACCATCAAGTTGACACTCCTTCTGCCAAGAGAGATTCAACTTCTGGCAGAGAGATTAAGCAAGATTTCTTGGAGAAGAAGTTAGAAGCTTCAAACGAAAATAAGTTGATTAAGCAAGAAGAAAGAGAGATAGGAGACACAGGCTTGAAGCCTTACATTCAGTATCTGAATCAGATGAAGGGATACATATACTTTGCTGCCGCTACTCTTTGTCACATTTTATTTGTAACTGGCCAAATAATTCAAAACTCATGGATGGCTCCTAATGTTGACAACCCTCATATCAAAACTCTGAAATTGATCTTAGTCTACTTGTTGATAGGAGTTGTTTCAATTGTTTTTATGTTAATCAGAACTTTTCTTATAGCTGCTTTAGGTCTTCTATCATCAAAACATCTATTTTCACAGTTGATGAACTCCCTTTTCCGCGCACCCATGTCTTTTTATGACTCCACACCTTTGGGAAGGATACTTAGCAGGGTATCTGCAGATATGAGCATTGTGGATCTCGATGTACCATTTTACCTTGCATATACTGTGGGGGGTACTACAAATTTTTATTCTAATCTTGCAGTTTTATCATTTGTGAGTTGGCAAGTCTTGTTTGTTGCCATACCACTGGTTTTTGCTGCGATTCAATTGCAGAAATACTACTTTGCTACTGCAAAAGCATTGATGAGGTTGAATGGCACAACAAAATCATTTGTAGCTAATCATGTAGCTGAAACTAATGCTGGAGCTGTGACAATAAGAGCCTTTAAGGAGGAAGATCGCTTTTTCAAGAAGAATCTTGATCTGATTGATGTCAATGCTAGTCCATTCTTCCATAGTTTCACTTCAAATGAATGGTTGATCCAACGGTTAGAAACAATCAGTGCTGTTGTTCTATCTGCTGCAGCACTTTGCATGGTTGTGCTTCCACCCGAGACTTTCCCCGCCGGATTTATTGGCATGGCACTCTCTTATGGCCTTTCACTGAACAATTCCTTAGTATTTTCAATTCAATTTCAATGCACTCTAGCAAATTATATAGTATCTGTAGAGAGGATAAATCAATATATGTATATACCAAGTGAGGCCCCAGAAGTTATAGAAGGAAATCGCCCGCCGGTTAATTGGCCAGATGCAGGCAAAGTAGAAATTAGTAACTTGCAGATAAGATACAGGGCTAATGGACCACTTGTACTCCATGGAATTACATGCACATTTGAAGGAGGACACAAGATTGGTATTGTTGGCAGGACAGGAAGTGGGAAGTCCACTCTTATTAGTGCTTTGTTTCGCCTTGTCGAGCCGGCCGGTGGAAGAATTGTAATGGATGGTGTAGACATATCCTCGATCGGCCTTCATGATTTGAGGTCACATTTAGGTGTTATACCTCAAGATCCTACTCTTTTTAATGGAACAGTTAGATATAATTTGGACCCTTTGTCTCAACATTCTGATGAAGAGATATGGGAGGTTCTTGGAAAGTGTCAGTTGCGAGAAGCCGTGCAAGAAAAAGAAAAGGGCTTAGACTCCTCAGTTGTTGAAGATGGATCGAATTGGAGTATGGGACAAAGGCAGTTATTCTGTCTAGGCCGCGCCCTTTTGAGGCGAAGTAGGATATTGGTGCTTGATGAAGCAACGGCATCAATTGATAATGCAACAGATCTTATTTTGCAGAAAACAATTAGAACAGAATTTGCAGATTGTACAGTGATCACAGTAGCACACAGGATACCAACTGTGATGGATTGCACCAAGGTTCTCTCCATAAGTGATGGAAAATTGGTAGAGTATGATGAGCCAAAGAAGTTAATGAAGAGAGAAGGGTCATTGTTTGGGAAGCTTGTGAAGGAATACTGGTCTCATTTTCAGTCTGCAGAATCTCATTGA 4446 0.4008 MDDFWSLICMDYDCSKARETPFCNDFKFLQDHSKCINNLLIICFDILLLIMLSFTMIKRTSSTPFHGQTRAERYSNLQLVSATSNGVLGLVHSCLGIWILEEMIRKNHTALPLNWWLVEFFQGITWLLASFTVLSLRLKHYPVTSLRLFAVLLLLASSILCSLSLFYAISSRGLSLKIALDVLSFPASILVLLCTFKVCHCDEKWKEKDESLYAPLNGQMNETDSVGDIVTPFAKAGFFSRMTFWWLNPLMKKGKEKTLEDEDIPKLREPDRAESCYSVFIEQLNKQKQKEPTLQPSVFWTIMSCHWREIWISGFFAFIKVVTLSCGPLLLNAFILVAEGNESFKYEGYVLAISLFFAKIIESLSQRQWYFRCRLVGMKVRSLLTAAIYKKQLKLSNAARLEHSGGEIMNYVTVDAYRIGEFPFWFHQMWTTSFQICIALVILVRAIGVATIASMVVIILTVLCNAPLAKLQQKFQSKLMVAQDERLKANSEALVNMKVLKLYAWEKHFKKAIEGLRNVELEMLSAVQSRKAYNIFLFWSSPILVSAASFAACYFLEIPLHANNVFTFVATLRLVQEPITTIPDVIGVVIQSKVAFARIGKFLEASELQNANCRKSCVDDNLRGSISTKSADFSWEDNVSKPTLRNINLEVRHGQKVAICGEVGSGKSTLLATILGEVPNTKGTIEVYGSFAYVSQTAWIQSGTIKENILFGADLDPQRYEETLYRSSLIKDLELFPYGDLTEIGERGVNLSGGQKQRIQLARALYQNADIYLLDDPFSAVDAHTATNLFKEYIMEGLAGKTVLLVTHQVDFLPAFDSVMLMLDGEILQAAPYHHLLESSREFQELVEAHKKTAGSDHQVDTPSAKRDSTSGREIKQDFLEKKLEASNENKLIKQEEREIGDTGLKPYIQYLNQMKGYIYFAAATLCHILFVTGQIIQNSWMAPNVDNPHIKTLKLILVYLLIGVVSIVFMLIRTFLIAALGLLSSKHLFSQLMNSLFRAPMSFYDSTPLGRILSRVSADMSIVDLDVPFYLAYTVGGTTNFYSNLAVLSFVSWQVLFVAIPLVFAAIQLQKYYFATAKALMRLNGTTKSFVANHVAETNAGAVTIRAFKEEDRFFKKNLDLIDVNASPFFHSFTSNEWLIQRLETISAVVLSAAALCMVVLPPETFPAGFIGMALSYGLSLNNSLVFSIQFQCTLANYIVSVERINQYMYIPSEAPEVIEGNRPPVNWPDAGKVEISNLQIRYRANGPLVLHGITCTFEGGHKIGIVGRTGSGKSTLISALFRLVEPAGGRIVMDGVDISSIGLHDLRSHLGVIPQDPTLFNGTVRYNLDPLSQHSDEEIWEVLGKCQLREAVQEKEKGLDSSVVEDGSNWSMGQRQLFCLGRALLRRSRILVLDEATASIDNATDLILQKTIRTEFADCTVITVAHRIPTVMDCTKVLSISDGKLVEYDEPKKLMKREGSLFGKLVKEYWSHFQSAESH* 1482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g3212 1481 CDD ABCC_MRP_domain1 626 826 - -
Ahy5g3212 1481 Pfam ABC transporter 1252 1400 IPR003439 GO:0005524
Ahy5g3212 1481 SUPERFAMILY ABC transporter transmembrane region 906 1215 IPR036640 GO:0005524|GO:0016021
Ahy5g3212 1481 CDD ABCC_MRP_domain2 1233 1453 - -
Ahy5g3212 1481 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 628 849 IPR003439 GO:0005524
Ahy5g3212 1481 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 311 591 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Ahy5g3212 1481 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 931 1198 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Ahy5g3212 1481 CDD ABC_6TM_ABCC_D1 312 599 IPR044746 GO:0140359
Ahy5g3212 1481 PANTHER ABC TRANSPORTER C FAMILY PROTEIN 73 1481 - -
Ahy5g3212 1481 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 73 1481 - -
Ahy5g3212 1481 CDD ABC_6TM_ABCC_D2 921 1210 IPR044726 GO:0140359
Ahy5g3212 1481 Pfam ABC transporter 644 778 IPR003439 GO:0005524
Ahy5g3212 1481 Gene3D - 1219 1470 IPR027417 -
Ahy5g3212 1481 ProSitePatterns ABC transporters family signature. 751 765 IPR017871 GO:0005524
Ahy5g3212 1481 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1225 1462 IPR027417 -
Ahy5g3212 1481 Pfam ABC transporter transmembrane region 922 1158 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Ahy5g3212 1481 Pfam ABC transporter transmembrane region 311 572 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Ahy5g3212 1481 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 621 849 IPR027417 -
Ahy5g3212 1481 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1235 1469 IPR003439 GO:0005524
Ahy5g3212 1481 MobiDBLite consensus disorder prediction 852 872 - -
Ahy5g3212 1481 Gene3D ABC transporter type 1, transmembrane domain 281 607 IPR036640 GO:0005524|GO:0016021
Ahy5g3212 1481 Gene3D ABC transporter type 1, transmembrane domain 882 1216 IPR036640 GO:0005524|GO:0016021
Ahy5g3212 1481 Gene3D - 621 855 IPR027417 -
Ahy5g3212 1481 SUPERFAMILY ABC transporter transmembrane region 299 599 IPR036640 GO:0005524|GO:0016021
Ahy5g3212 1481 SMART AAA_5 653 826 IPR003593 -
Ahy5g3212 1481 SMART AAA_5 1261 1453 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g3212 Ahy-Chr5 114007266 114013960 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g3212 620 871 Calmodulin-binding Proteins AT2G36910 30.769 8.14e-25 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g3212 K05666 - gmx:100787314 2252.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g3625 15 158998606 159005443 Ahy5g3212 5 114007266 114013960 hybridization
Ahy5g3212 5 114007266 114013960 Ahy19g2841 19 150663971 150670978 PCT
Ahy5g3212 5 114007266 114013960 Ahy9g2767 9 116616909 116623419 PCT
Ahy19g2841 19 150663971 150670978 Ahy5g3212 5 114007266 114013960 PCT
Ahy9g2767 9 116616909 116623419 Ahy5g3212 5 114007266 114013960 PCT