Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g3190 ATGAGTAATGAGGAGGATTGGGATCTCTTTGCCATAGTTAGAAGCTGCAAAGCTGCAAACAACACTGCACAAACTCCACAAGACACAACAAAAACTAGTAGTAATAGCATCATGTCTACTTTTTCTACAACTTGCTTGGCCACTACTACTATCACTGCAGAACAAAATGATGGTCCATTTTCTTCTAACAATTTTGTGCAGCCCAGGACCAATGGTTTCCAAGAGTTAGAACAATTGCTCAATACCTTTAACCCCACCATCACCACCACCACCACTACCACTAGTGCCCATGGCATCAATTCTAATAATCCTCCCACTTTTCCTCATTTCACAGCACCGCCATCCACCCTTGGAGCCTCCACTTCTGGTTTTGATGATAGATTCCACCACCACCAACAACATCAACAAAAGCAGCATAATCTACTACAGGTTCAAGTTCCCCAAACTAGTACAACTACTTCTCTGACTTTATTACCAAGCTCAGAATCACAATCACAATCACAAACGCAAACACCCAGATCAAGAAAAAGAAAAAGCCAACAGAAAAAAATGGTATGCCATGTAACCGCAGATAACCTCTCATCAGATTTGTGGGCATGGCGTAAATATGGCCAGAAACCCATCAAGGGTTCCCCATATCCAAGAAACTATTACAGATGCAGCAGCTGCAAGGGTTGTGTAGCAAGAAAGCAAGTAGAGCGAAGCTTATCAGACCCCACCATGTTTGTTGTAACTTACACCGGAGAACACAAGCACGCTAAACCGGCTCACCGGAACTCACTCGCCGGAAGCACCCGGAAACCATCCACGCCTCGTTTAGCTGAGACCCAAGAAAATAATGATACTAAGAATCCTAATAATAATAACAAAAATAATAGTCCTGATGAGAAGGCTCAGAATAGCAGCACCACAACGAAAGAGCAGAACGCTGAACCGCCGGAAATTGAACAAGAAATAGATGATTCTTCATGTGAAGACAGTGATGATGATGGTGTCTTGATTCCCAACAGCACTGCTGCAATGTCGGATGCAGTGTTCTTGGGAAGCACCTCCGCCGCTGAAACATGGCACTGCGACGGTGGATTTGAGAATAGGTCCGATCCGGACGGTCCAAGTAATCGGATCTAA 1128 0.4433 MSNEEDWDLFAIVRSCKAANNTAQTPQDTTKTSSNSIMSTFSTTCLATTTITAEQNDGPFSSNNFVQPRTNGFQELEQLLNTFNPTITTTTTTTSAHGINSNNPPTFPHFTAPPSTLGASTSGFDDRFHHHQQHQQKQHNLLQVQVPQTSTTTSLTLLPSSESQSQSQTQTPRSRKRKSQQKKMVCHVTADNLSSDLWAWRKYGQKPIKGSPYPRNYYRCSSCKGCVARKQVERSLSDPTMFVVTYTGEHKHAKPAHRNSLAGSTRKPSTPRLAETQENNDTKNPNNNNKNNSPDEKAQNSSTTTKEQNAEPPEIEQEIDDSSCEDSDDDGVLIPNSTAAMSDAVFLGSTSAAETWHCDGGFENRSDPDGPSNRI* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g3190 375 MobiDBLite consensus disorder prediction 314 328 - -
Ahy5g3190 375 Gene3D WRKY domain 177 248 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy5g3190 375 SUPERFAMILY WRKY DNA-binding domain 189 255 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy5g3190 375 ProSiteProfiles WRKY domain profile. 189 255 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy5g3190 375 SMART WRKY_cls 194 254 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy5g3190 375 MobiDBLite consensus disorder prediction 112 186 - -
Ahy5g3190 375 MobiDBLite consensus disorder prediction 262 310 - -
Ahy5g3190 375 PANTHER WRKY TRANSCRIPTION FACTOR 27-RELATED 5 348 - -
Ahy5g3190 375 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 5 348 IPR044810 GO:0003700
Ahy5g3190 375 MobiDBLite consensus disorder prediction 249 336 - -
Ahy5g3190 375 MobiDBLite consensus disorder prediction 137 174 - -
Ahy5g3190 375 Pfam WRKY DNA -binding domain 196 252 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g3190 Ahy-Chr5 113772578 113774483 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g3190 173 271 WRKY Transcription Factor Family AT5G52830 79.798 2.92e-53 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Ahy5g3190 WRKY 1.90E-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g3190 K13425 - aprc:113866622 272.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g3604 15 158766019 158767949 Ahy5g3190 5 113772578 113774483 hybridization