Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g3187 ATGCCTGTGTACGACCTCCCTTCTAAGATCCTTTGTCGGGTCATCAACGTGCAGCTCAAGGCGGAGCCCGACATGGATGAGGTGCTTGCCCAGATTACCTTGCTTCCGGAGCAAAATCAAGACGAGACCGTCGAGAAAGAGCCTCCGTTGCCACCACGGTGTCATCGTCCCTTGCACTTAGATAAATGGAGCCTCAGCAAACTATCAGCAGTGAGCAGGATCAGATTGAAACCTGGAGCTTCAAAGTTCAGTGATAGTATGTATCTGGAAGTTAACAGTAATTGTGGATACAGAAAAAATGAGAGCAGACATTATCCAATAGATAGCATGGGAGTGCGAGGAATTTGTGAAGATGAAATCTATGCATATTGA 372 0.4651 MPVYDLPSKILCRVINVQLKAEPDMDEVLAQITLLPEQNQDETVEKEPPLPPRCHRPLHLDKWSLSKLSAVSRIRLKPGASKFSDSMYLEVNSNCGYRKNESRHYPIDSMGVRGICEDEIYAY* 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g3187 123 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 2 54 IPR044835 GO:0003677|GO:0006355|GO:0009725
Ahy5g3187 123 PANTHER AUXIN RESPONSE FACTOR 2 2 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g3187 Ahy-Chr5 113732186 113744047 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g3187 1 52 B3 DNA Binding Superfamily AT5G62000 79.245 3.33e-21 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g3187 - - ahf:112802928 249.595