Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g3177 ATGGTATCCAAAAACCCGAACCCGCCGGAGGGCTTCTATTTGGACCCCACCGGTGCCGCTCTTCCCGGCCTCGCCCCCTTCGCCTCCGTCACTGCCGCCGCCACCGCTGTATCCGCCCCTAACTCCGTGGAGGACGCCGCAAAGAAAATCCGAAAGCCATACACTATCACTAAGTCCAGGGAGAATTGGACTGAACCCGAACACGACAAGTTCCTCGAAGCTCTTCAACTGTTTGATCGTGACTGGAAAAAGATTGGAGCATTTGTTGGATCAAAGACAGTTATACAGATTCGTAGTCATGCACAGAAATACTTCATAAAAGTTCAGAAGAGTGGGACAAGTGAGCATCTTCCTCCACCCAGGCCGAAAAGAAAAGCTGCCCATCCTTATCCTCAAAAGGCTTCCAAAAATGCTCCTTTACTCTCACAGCTATCAGAATCTTTTCAATCTTCATCTGCTTTACTTGAGTCCGGATATGTCCTGAAACATGACCCCTCCACAATGCTTAAAACTCCTATTATGAACACTGTGGTGCCTTCATGGTCAAACTCCACCTTGCAAACCACTAATTTACTGCATGTACCAAAAGTGAACGACCCTTCCGGTAGCAGTGAGAGTACCCCCAGAGTGCAGCCAGGTGATGAATCCAATGGACAGGGGAATAGTAGCTTTCCACTAAGAGTGCTTCCCGATTTCACTCAAGTATACAGCTTCATTGGCAGTGTATTTGATCCAAATACAACTGATCATTTGCACAAACTGAAAAACATGGACCGTATAGATGTTGAGACGGTCCTGTTGTTGATGAGAAATCTCTCTGTCAATTTAACTAGCCCAGATTTTGAGGACCATAGGAAGGTTCTTTCAACATACGAGGTTGAACTTGATACAGATGACTACATCAATGCAGATATACTTCAGGATGATCAGTTGAAGAGTGCTGCTACCTAG 951 0.4627 MVSKNPNPPEGFYLDPTGAALPGLAPFASVTAAATAVSAPNSVEDAAKKIRKPYTITKSRENWTEPEHDKFLEALQLFDRDWKKIGAFVGSKTVIQIRSHAQKYFIKVQKSGTSEHLPPPRPKRKAAHPYPQKASKNAPLLSQLSESFQSSSALLESGYVLKHDPSTMLKTPIMNTVVPSWSNSTLQTTNLLHVPKVNDPSGSSESTPRVQPGDESNGQGNSSFPLRVLPDFTQVYSFIGSVFDPNTTDHLHKLKNMDRIDVETVLLLMRNLSVNLTSPDFEDHRKVLSTYEVELDTDDYINADILQDDQLKSAAT* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g3177 316 PANTHER SWI/SNF COMPLEX-RELATED 3 304 - -
Ahy5g3177 316 MobiDBLite consensus disorder prediction 110 135 - -
Ahy5g3177 316 SUPERFAMILY Homeodomain-like 54 110 IPR009057 -
Ahy5g3177 316 ProSiteProfiles SANT domain profile. 58 109 IPR017884 -
Ahy5g3177 316 PANTHER PROTEIN REVEILLE 6 3 304 - -
Ahy5g3177 316 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 55 109 IPR017930 -
Ahy5g3177 316 ProSiteProfiles Myb-like domain profile. 55 105 IPR001005 -
Ahy5g3177 316 Pfam Myb-like DNA-binding domain 60 105 IPR001005 -
Ahy5g3177 316 MobiDBLite consensus disorder prediction 194 224 - -
Ahy5g3177 316 Gene3D - 62 110 - -
Ahy5g3177 316 CDD SANT 62 105 IPR001005 -
Ahy5g3177 316 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 58 107 IPR006447 GO:0003677
Ahy5g3177 316 SMART sant 59 107 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g3177 Ahy-Chr5 113669075 113672876 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Ahy5g3177 Myb_DNA-binding 1.60E-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g3177 - - gmx:100783949 449.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g3592 15 158664614 158668357 Ahy5g3177 5 113669075 113672876 hybridization