Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g3171 ATGGCGGCAGGACTCTCCGCCGCAATTGCCTGGAAGCCCCTCCTCCGTCCCCACCACCACCACCACAACAAACACCAATCCTTCAATCCTCACACTCCAACGCCTGCTTCCTTCTTCAGAACACACCAGAAGCTCGCAACTATAAAGTTCACTGCCTGTGTTCTCATGGAGGACCCCAAGAAAACCGCCAGTAGCCACGTGGCGGAAAGCGAAAAGGACGAAGAAGAAACCGTTGTGGTTTATCCTCAGCTGGTTCCGCCACGTGTCGCGGAGAGATTGGCCAGGAAGAAATCGGAGAGATTAACGTACCTTATTACCGCCATGATGTCTAGCTTTGGCATCACTTCCATGGCGGTCTTCGCTGTTTATTATAGATTCGCATGGCAATTTCAGGGTGGAGAAATTCCATTGTCTGAAATGTTTGGCACATTTGCTCTCTCCGTTGGTGCTGCTGTGGGTATGGAATTTTGGGCTAGGTGGGCACACAGAGCTCTCTGGCATGCTTCCTTGTGGCACATGCATGAGGGTCTTGGAATCACAGTGTTTGGAATGGCTTACATGTTTGTGCACGATGGCTTGGTTCATAGGAGATTCCCTGTAGGTCCCATTGCCAATGTTCCCTACTTCAGAAGAGTTGCTGCTGCTCACAAACTTCACCATTCGGACAAATTCAATGGGGTGCCATATGGCCTCTTTTTGGGACCAAAGGAAATTGAAGAAGTGGGAGGGTTAGAAGAGCTTGAGAAAGAGATTAGTAGGAGAACAAAATCTTATAATAATAATAATAATAAAAATAGTTCATGA 804 0.4789 MAAGLSAAIAWKPLLRPHHHHHNKHQSFNPHTPTPASFFRTHQKLATIKFTACVLMEDPKKTASSHVAESEKDEEETVVVYPQLVPPRVAERLARKKSERLTYLITAMMSSFGITSMAVFAVYYRFAWQFQGGEIPLSEMFGTFALSVGAAVGMEFWARWAHRALWHASLWHMHEGLGITVFGMAYMFVHDGLVHRRFPVGPIANVPYFRRVAAAHKLHHSDKFNGVPYGLFLGPKEIEEVGGLEELEKEISRRTKSYNNNNNKNSS* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g3171 267 Coils Coil 244 264 - -
Ahy5g3171 267 PANTHER BETA-CAROTENE 3-HYDROXYLASE 1, CHLOROPLASTIC 26 175 IPR045019 GO:0016491
Ahy5g3171 267 PANTHER BETA-CAROTENE HYDROXYLASE 176 257 - -
Ahy5g3171 267 PANTHER BETA-CAROTENE 3-HYDROXYLASE 1, CHLOROPLASTIC 176 257 IPR045019 GO:0016491
Ahy5g3171 267 PANTHER BETA-CAROTENE HYDROXYLASE 26 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g3171 Ahy-Chr5 113610348 113613065 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g3171 1 265 Chloroplast and Mitochondria Gene Families AT5G52570 51.852 4.48e-79 237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g3585 15 158618052 158620718 Ahy5g3171 5 113610348 113613065 hybridization