Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g3161 ATGTCATCGCCGGGCTTCACCGGCGGCGGGGCATCAGATTTCTTCACCGGAGCAGCCCGATCCAGCACCATGAACACGAACCCCGGCGCCTCCGCCGTGGCAGCCAACAACCACCGGCACCTCCACCCTTCCCACCCCCTGTACCGAACCCAACAGCAGCTGCCCGCACTGTTTCTAGATCCTTCCTCACAGATCACGCCTCGGCACCAAACACCAACAACACAACCACCACCAACAACCCTCATCGGTAAACGCACCCTCGCCGAATTTCAAACCCAACAACAACATAACCACCTCCTTAACAACCACAACCACAACAGCAATAACAACCATGTCCTCTCTAACCTCCTACTCCGCTCCGTTAAGCCAAGGACGGCGTCGTTTCACACAGGTTCCCCTTTGTCCCCTTTATCGCCCATAGACTTCTCAATCCCTGAATTGCAAATCCCTTCCTCAACTCATGCCTTCCAAACGCAGCGTTTTGGCATGCCTCTCTTCAACCAGCTTCGCCCTAACCCCATTCACTCCAACAGCCTCCCCTTGCCTCCTCCTAACTCCAATAATCATTTCCCCTACCGATGCTCCAATTTGAGTGGTTCCGTTTCCAACCGGGTCCAGCTCCCGCTCCCGGCCGAACCGGAGAACAAGATTAATACGATGGACCACAGGCTTCTGGAATTGGAGAAGCAGCTTCTAGAAGACGAAGAAGAAGAAGCTGAAGCCGATGCGGCTTCTGTGATCACAACAAGCGCGTGGTCAGAGACCATTCAGAATCTCATGGGAAACGGGTCCACACCCAAACCAGCTTCTTCGTCCCCTACATCCTCAACAACATCTTCAACTTCGTCTTCTTCCTCCGTGGCTTCTCCTGCCATAGGGTGCTGGAAGCAGACGCTAATGGAGGCCGCATCTGCCATAGCCGAAGGTAAACAAGATTCTGCCACTGAGATCCTGGCCAGGTTGAGTCAAGTTTCCAACCCGAATGGAAATTCGGATCAAAGGTTGATGGATTGCATGGTTTCGGCGCTCAAATCGAGGGTAAACCCGCTGGAGAATCCTCCTCCCGTGGCCGAGTTGTTCAGCAACGAACACGCCGAGTCGACTCAGTTGATGTTTGAAAACTCGCTCTGTTTCATGGTAGGGTTCATGGCAGCCAACTTCGCAATCCTCGAAGCTGCATTTGAGAACAAAACGGAGCTGAAGAGGTTCTGCGTGGTTGATTTCGATATAGGCCACGGGAAACAGTACGTGAGCCTTCTACTCGCGCTCTCCGCGCGTGGGAGAACCCCACCGGCTATGGTAAGGATCGTGGCGGTGGCGGACACCGGCGGCCAAGAAGAGAGATTAAAATCTGTGGGCGAAATGCTAGCAAGACAGGCAGAGAGGTTTAGGATCGGATTCGAGTTCAAAATCGTTCAGGTCACTCAGCGATTCTCCGAGTTGACCCGCGAGTCGCTTGGATGCGACGCGGATGAGTTTCTAGCTGTGAACTTCGCTTTCAAATTGAACCGAATCCCGGACGAGAGCGTGTCCACGGAGAATCCACGCGACGAGCTCTTGAGGCGCGTGAAGTCACTCTCGCCGCGCGTGGTTACAATCATCGAACAGGAAATAAACGCCAACACGGCGCCGTTTCTGGCGCGCGTGGCCGATTCGTGTTCGTATTACGGCGCGCTCTTCGACTCAGTCGAGTCCTCACTCGGCAAGGACAACAATAGTAACTCCGAGCGAGTCAAGGTGGAGGAAGGACTGAGTCGAAGGGTTTGCAACTCGTTGGCGTGTGAAGGCAGAGACCGCGTGGAGCGTTACGAAGTTTTCGGAAAATGGCGGGCACGCATGGGAATGGCGGGGTTCAAGTCGAAGCCACTGAGTCAGAACGTGGCCGAGTCGATCAAGTCACGACTCGCCCAGAGCAACAATTGTAACAGCCGAGTCAACTCGGGCCTCACCGTTAAAGAAGAGAACGGTGGGATTTGCTTTGGATGGATGGGGAAAACTCTCACCGTCGCTTCTGCTTGGCTCTAA 2025 0.5432 MSSPGFTGGGASDFFTGAARSSTMNTNPGASAVAANNHRHLHPSHPLYRTQQQLPALFLDPSSQITPRHQTPTTQPPPTTLIGKRTLAEFQTQQQHNHLLNNHNHNSNNNHVLSNLLLRSVKPRTASFHTGSPLSPLSPIDFSIPELQIPSSTHAFQTQRFGMPLFNQLRPNPIHSNSLPLPPPNSNNHFPYRCSNLSGSVSNRVQLPLPAEPENKINTMDHRLLELEKQLLEDEEEEAEADAASVITTSAWSETIQNLMGNGSTPKPASSSPTSSTTSSTSSSSSVASPAIGCWKQTLMEAASAIAEGKQDSATEILARLSQVSNPNGNSDQRLMDCMVSALKSRVNPLENPPPVAELFSNEHAESTQLMFENSLCFMVGFMAANFAILEAAFENKTELKRFCVVDFDIGHGKQYVSLLLALSARGRTPPAMVRIVAVADTGGQEERLKSVGEMLARQAERFRIGFEFKIVQVTQRFSELTRESLGCDADEFLAVNFAFKLNRIPDESVSTENPRDELLRRVKSLSPRVVTIIEQEINANTAPFLARVADSCSYYGALFDSVESSLGKDNNSNSERVKVEEGLSRRVCNSLACEGRDRVERYEVFGKWRARMGMAGFKSKPLSQNVAESIKSRLAQSNNCNSRVNSGLTVKEENGGICFGWMGKTLTVASAWL* 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g3161 674 Pfam GRAS domain family 296 673 IPR005202 -
Ahy5g3161 674 ProSiteProfiles GRAS family profile. 286 674 IPR005202 -
Ahy5g3161 674 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 76 673 IPR005202 -
Ahy5g3161 674 Coils Coil 217 244 - -
Ahy5g3161 674 MobiDBLite consensus disorder prediction 258 288 - -
Ahy5g3161 674 PANTHER SCARECROW-LIKE PROTEIN 8 76 673 IPR030013 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g3161 Ahy-Chr5 113466126 113468765 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g3161 44 673 GRAS Transcription Factor Family AT5G52510 45.942 5.47e-152 452
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Ahy5g3161 GRAS 2.80E-98 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g3161 - - aip:107644872 1177.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g3573 15 158503665 158506296 Ahy5g3161 5 113466126 113468765 hybridization