Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g3145 ATGGCAGTTTCTGCAAAAGAAAAAGCAAAAGCAAAAGCGAAGGGCTATGATGGGAGTATGGAAGTGGTGAAAACGGAAGATAGAATAGATACAATAATCAGACAAGCGATTGGCAGGGAACCTTTTTTCACTTTTCCAAGGGCCACTGACACCCCTGTTCAGTGGATTCAGTTACTTCATGCCTTGGATCAGCAGGGTGTTAGCAATTCTTTTCCAGAACTTCCAGGGTGGCCATTGCTCTATCCTGTAAAGGTTCAGTTGCAGAAGTGTGACAAATGTTCTCGAGAGTTTTGCTCCACCATTAATTATAGAAGACATATACGTGCACACCATCGATTGAAAAAGCTTGATAAGGATTCTACAAAAAATAGGGACCTTTTAGGAGCATATTGGGATAAGCTCTCTATAGAAGAGGCAAAGGAAGTTGTATCGTTTGAGAATGTGATGCTGGAGGAAGTTCCAGCATCTTCAATTTTAGAAGCTCTGACAACCCTTCTACAAAAGCCAGGATTTTCTTCATTACCACAGTATTATCTGAGGGCTGGTGCTGCCCTTTTGGATATTGTTCACTCTCAGTCTTCCTGCTTTCCCTTATCTTCCCAGGAGTTGTTCACTATCCTTGATGATGCTAGTGAAAAAACATGTTTATGTGGGACTGCAGTGTCAATGCAAAGATATATTTTTGATGGAGAGGCTGGAAAAATTGGTCTTGAACCAAGAAATTTAGTTGCTTGCACATGTTTCTTGCTAGAACAGAAGTTGGTGAAGGCATGGCTTGCTGACAAGGATGCTGAAGCCTTGAGGTGCCACAGGCAGCTGGTGGAGGAGGAAGAAGCTGCTCAAAAAAGACAAGCTGAGATATTGGAGAGGAGACGCCAGAAGAAGCTTAGACAAAAAGACCAGAAGGCAAGGGAACAAAGGCATGAGGCAGAAATTGAAGAGCACATTGGGAGTGCAGAAGATGATTTATCAGCAGCAGAAGCATCTTTGGCTACTATTGATTCTGAAGCACATAATCTGGAAACATTCATAGATAGCGCTCCTTCATATGATCCTTTTCAATGCTCTGACACAAATGTAGGACTAGATGGCGTTCAATCGAGTTACAATCTTGGCAGTGATCAGTATATTGAGAGACGGTCGGCACGTCGACCCAATCGTAGGCTCACAGCAGTTTCCAGACAGAAGGGTCTGCAAAAATCACAATGGGCTGTAGCGAATGATTCTCATACAAGCCAGAACTCAACACTTTCAAAGATTGAAGTCATTCAAAAATATGGAACCCATCGTGATCATAGGGTAGCTACAGTAGCTAATGGTAGTAGAGTTTGGAGTCCAAAGTCAAAACCAGGAATTGATAGGATGGTTCCAGAAGCTAGAGTAGAGAAAGAACCAGACCTAGATAAGGATCATGAAGTTTTGATAGGATCTATATCAATTACTCTAGGGAATTGCAGCCAATCAGAGCGTAATGCAGTGGCATCTCGAGCAGACTGCAATGTTGACAATCTGGCCAACCAGAATAGTTCTCAGAATAAGCCATTGAATCCTGATTTTGTCCAGAATGGCAACAATATGGCCACTAAGCTTCGGAGACCAGTTAGCCGGCACGAAACTAAAAATCCACTTCCAGTTCAAAGTGGTGAGACAGAAGTGAATACAATTCATGAAAATGGAGATTGTCAGAACCAGTCAGATCCAAGTTGTTTAAGGTCGTGCAGTACAGATGGTAGTGATGTCGGTTTCGAGATTAATGATTCCAATACAGAGGGGATAATGGATCCAGGAAGCTTACAGTTATTATCCAGCCATGCTGCAAAAAATTTTCTCGAACAAAGATGGAAAGAAGCTATGTCATCAAATCATCTGCTTTTGATTGTTTCCGACTATGAACCTCCTGGATGCCAGGAAATACAGGATTCTAGAATGGCAGTATGTCAATCTTCTGAGGTTACAGTGAAGCGGTTAGCTGCAGCCCCGAAGGTTGCTAAATCCAATCACAGAATGAAGCCTGAAAAGGGAACCAAGATAAAATATATTCCCAAACAAAAGACAGCTGCCTAA 2064 0.423 MAVSAKEKAKAKAKGYDGSMEVVKTEDRIDTIIRQAIGREPFFTFPRATDTPVQWIQLLHALDQQGVSNSFPELPGWPLLYPVKVQLQKCDKCSREFCSTINYRRHIRAHHRLKKLDKDSTKNRDLLGAYWDKLSIEEAKEVVSFENVMLEEVPASSILEALTTLLQKPGFSSLPQYYLRAGAALLDIVHSQSSCFPLSSQELFTILDDASEKTCLCGTAVSMQRYIFDGEAGKIGLEPRNLVACTCFLLEQKLVKAWLADKDAEALRCHRQLVEEEEAAQKRQAEILERRRQKKLRQKDQKAREQRHEAEIEEHIGSAEDDLSAAEASLATIDSEAHNLETFIDSAPSYDPFQCSDTNVGLDGVQSSYNLGSDQYIERRSARRPNRRLTAVSRQKGLQKSQWAVANDSHTSQNSTLSKIEVIQKYGTHRDHRVATVANGSRVWSPKSKPGIDRMVPEARVEKEPDLDKDHEVLIGSISITLGNCSQSERNAVASRADCNVDNLANQNSSQNKPLNPDFVQNGNNMATKLRRPVSRHETKNPLPVQSGETEVNTIHENGDCQNQSDPSCLRSCSTDGSDVGFEINDSNTEGIMDPGSLQLLSSHAAKNFLEQRWKEAMSSNHLLLIVSDYEPPGCQEIQDSRMAVCQSSEVTVKRLAAAPKVAKSNHRMKPEKGTKIKYIPKQKTAA* 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g3145 687 MobiDBLite consensus disorder prediction 659 687 - -
Ahy5g3145 687 ProSiteProfiles Zinc finger C2H2 type domain profile. 88 115 IPR013087 -
Ahy5g3145 687 Coils Coil 271 313 - -
Ahy5g3145 687 MobiDBLite consensus disorder prediction 665 679 - -
Ahy5g3145 687 MobiDBLite consensus disorder prediction 504 524 - -
Ahy5g3145 687 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 12 686 - -
Ahy5g3145 687 ProSitePatterns Zinc finger C2H2 type domain signature. 90 111 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g3145 Ahy-Chr5 113275772 113281369 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g3145 20 684 C2H2 Transcription Factor Family AT4G25610 40.323 2.19e-139 419
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Ahy5g3145 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g3145 - - gmx:100809067 843.573
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g3554 15 158325092 158330577 Ahy5g3145 5 113275772 113281369 hybridization
Ahy5g3145 5 113275772 113281369 Ahy19g3571 19 158376254 158381857 PCT
Ahy5g3145 5 113275772 113281369 Ahy9g2055 9 109100709 109106324 PCT
Ahy19g3571 19 158376254 158381857 Ahy5g3145 5 113275772 113281369 PCT
Ahy9g2055 9 109100709 109106324 Ahy5g3145 5 113275772 113281369 PCT