Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g3143 ATGGCCTCTGCTTCGCTTCTTCTCACTCTCTCCACGCTTTCGCTGCTTCTTTCACCCTCTTTTTCCGACAGCAGCAGGAAAGAACTAAGGGAGAAGGAGGGGTTGCTGTTGTTGAAGAAGGAAAATGCATCATCACATTATATGTTAGGGTTAGGCCACTCAGTTAATCCAAACGGCATTGATCCAACACGTGTTGTCCAGATCTCATGGCAACCAAGAGTTTTTCTATATAGAGAGTTCTTGTCTGCCAAGGAGTGTGACTACCTTATTTCTTTGGCGTATGATCTGAACGAAAAATCCTTTGATGCGGCCAATGGGAGACTTGCATCGGAAACTTCGTTGGATATCGAAGATGATATTGTTGCAAAGATTGAAGAAAGAATTTCGCTTTGGACTTTCCTTCCTAAAGAGAACAGCAAGCCTTTGCAGGTCAAGCATTATGAGCTTGAACAGGATGGCCAGAACTTAGATTATTTTACGAACAAGACCAAATTGGAATCAAATGGACCTCTAATGGCAACCGTTATTTTATATCTCTCAAATTCTACACAAGGGGGTCAAATTCTCTTTCCCGAATCAGAGCCGAAGAGTAGCGGCATGTCGGATTGTGGAGAAAGTAACAAGTTTCTCCAGCCAGTAAAAGGGAATGCAGTTCTGTTCTTCTCCCTCCACCTAAGTGCAACTCATGACAAGAGGAGTATACATTCTAGATGCCCTATCCTTAAGGGGGATATGTGGTCTGCAATTAAATACTTATATGCAAAACCAATTGGTGAGAGTAAGGTCCCAACCGTATCAGATGGTGGTGATTGTATTGATGAGGATGACAATTGCGCTGCTTGGGCGGCCATGGGAGAATGTCAACGAAATCCTGTGTTCATGATTGGTTCCCAAGATTATTATGGTACATGTAGGAAAAGTTGTCATTTATGTTGA 936 0.4274 MASASLLLTLSTLSLLLSPSFSDSSRKELREKEGLLLLKKENASSHYMLGLGHSVNPNGIDPTRVVQISWQPRVFLYREFLSAKECDYLISLAYDLNEKSFDAANGRLASETSLDIEDDIVAKIEERISLWTFLPKENSKPLQVKHYELEQDGQNLDYFTNKTKLESNGPLMATVILYLSNSTQGGQILFPESEPKSSGMSDCGESNKFLQPVKGNAVLFFSLHLSATHDKRSIHSRCPILKGDMWSAIKYLYAKPIGESKVPTVSDGGDCIDEDDNCAAWAAMGECQRNPVFMIGSQDYYGTCRKSCHLC* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g3143 311 SMART p4hc 72 253 IPR006620 GO:0005506|GO:0016705|GO:0031418
Ahy5g3143 311 Gene3D q2cbj1_9rhob like domain 60 253 - -
Ahy5g3143 311 ProSiteProfiles ShKT domain profile. 271 311 IPR003582 -
Ahy5g3143 311 Pfam 2OG-Fe(II) oxygenase superfamily 143 252 IPR044862 -
Ahy5g3143 311 PANTHER PROLYL 4-HYDROXYLASE 12-RELATED 5 311 - -
Ahy5g3143 311 SMART ShkT_1 270 311 IPR003582 -
Ahy5g3143 311 PANTHER PROLYL 4-HYDROXYLASE ALPHA SUBUNIT 5 311 IPR045054 -
Ahy5g3143 311 Pfam ShK domain-like 271 311 IPR003582 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g3143 Ahy-Chr5 113253795 113256416 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g3143 K00472 - gmx:100775928 383.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g3553 15 158316331 158324629 Ahy5g3143 5 113253795 113256416 hybridization