Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g3102 ATGTTGATTTCTTCAGTTTCAGCATTTATGTTGCAATTCCATTATGCTTGTAATGTTACATTCAATTTGCATGTAAAAAAACAAATACTTTTTAGGTGGGCTGCTATAGCATCCCATCTTCCAGGAAGAACAGATAATGAAATCAAGAACTTTTGGAACACGCAACTGAAGAAGCGCCTGCCTCGATCCTCCTTCGTGCCTGATCATAACAATGTTAAATCTGAATCTCCTTCTACACGCCATATGGTGCAATGGGAAAGTGCAAGAGTTGAAGCTGAGGCAAGGTTGTCAATGGAATCCTCATTGCATAATTCATTCTCAGCAAGTGAATCATACCAGGATCACTTTCTCCAACTCTGGCATTCTGAGGTTGGACAGTCTTTTCGCGTGATCAAGGCGAAAGAAGAAGGAGCAGTGGTGACTCAGAACCTTGTGTCACAAGCATCATTATCTTCGTCCAAATTGGAGTCGAGTTCTGAAGTCTCATTGAAGTTGAAGAACACAGAAAGCAGTTTCTTTGCTGACATTACACATGAACAACAAAAAAGTAGCTCTAAGGCAAAGCTTGAAGATGGTGGCACGGCCGAGTCGAGTTTAGGCTATTATGAATTTCTTGATACTTCTGATTCTTCAATAAATCATCTGCTAGATGTGCCTGATGGGGAAGTGTTGTTCTTAGGACAGAATGACAATTTCCTCAATACCCTTGATGGTAGATGTGAGTAA 726 0.4063 MLISSVSAFMLQFHYACNVTFNLHVKKQILFRWAAIASHLPGRTDNEIKNFWNTQLKKRLPRSSFVPDHNNVKSESPSTRHMVQWESARVEAEARLSMESSLHNSFSASESYQDHFLQLWHSEVGQSFRVIKAKEEGAVVTQNLVSQASLSSSKLESSSEVSLKLKNTESSFFADITHEQQKSSSKAKLEDGGTAESSLGYYEFLDTSDSSINHLLDVPDGEVLFLGQNDNFLNTLDGRCE* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g3102 241 Gene3D - 14 86 - -
Ahy5g3102 241 SUPERFAMILY Homeodomain-like 31 65 IPR009057 -
Ahy5g3102 241 CDD SANT 32 54 IPR001005 -
Ahy5g3102 241 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 32 60 IPR017930 -
Ahy5g3102 241 Pfam Myb-like DNA-binding domain 32 55 IPR001005 -
Ahy5g3102 241 PANTHER MYB TRANSCRIPTION FACTOR MIXTA-LIKE PROTEIN 26 227 - -
Ahy5g3102 241 ProSiteProfiles Myb-like domain profile. 32 56 IPR001005 -
Ahy5g3102 241 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 26 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g3102 Ahy-Chr5 112714809 112716950 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g3102 32 229 MYB Transcription Factor Family AT3G61250 42.791 2.39e-39 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Ahy5g3102 Myb_DNA-binding 1.10E-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g3102 K09422 - gmx:100807142 229.18