Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g3092 ATGACTCCGCCTCCACCCACGCCGGTGGACACCTCCGACTCCCCCGCTACCGGCGGTGAGTCTCAGAGATCCATTCCGACTCCCTTTCTAACTAAGACCTACCAGCTCGTTGAGGACCAGTCCATTGATGACGTCATCTCCTGGAACGACGACGGATCCACCTTCATCGTCTGGAATCCTACCGTCTTCGCCAGAGACCTTCTCCCTAAGTATTTCAAGCACAACAATTTCTCTAGCTTTGTTCGCCAGCTCAACACCTATGGATTTAGAAAAGTTGTACCTGATCGGTGGGAATTCTCCAACGACTGTTTCCGCCGGGGAGAGAAGCGCCTCCTCTGCGAGATTCAGCGCCGGAAGATCTCCACGCCCTCACCGTCGCCGTCTCCCACGGCTGCCGGGATTGCCACCGCCACCGTCGCGGTTCCTTCTCCGATGCCGTTGACCGCTATACCCACGGCGATGCCGATAATATCACCGTCTAACTCCGGCGACGAGCAGGTGATATCGTCGAGCTCTTCGCCGTCGCGAGCCCCGGCGGAGCTCCTCGACGAAAACGAGAGGCTACGGAAGGAGAACGTGCAGCTCACGAAGGAGCTCGCCGAGATGAGATCGCTTTGCAACAACATCTTCTCCCTGATGTCGAATTACGCCACCACCAACGCCGCCACAACTACCACCACAAACAACAGCAACAGCAACCAAATCGATGGAAGCGCCCAAGGAAGCAGAGATTCCGCTTTCACGGCAGTGAGGCCGCTAGATTTGATGCCGGTGAAAAGGAGTTCGAGCGGGGAACCGTGGACGGAAACGGCGACGGCGATGATGGTGGAGGAGATGAATCCGAAGCTCTTTGGCGTGGCAATTGGAGCAAAGCGTGCGAGAGAAGGTGGTGGTGGTGGTGGTGGTGAAGGAGGAGGAGGAGGAGGAGGAGGTGGTAGTGCTGGTGGAAGAGAACGGGAGGAGGATACGCTGTTGCGCCTTCATCAGCCTGGTTATGCGGACGTGAAATCGGAGCCGTTAGATTGCCAGAACCATCGCGATAATAGTAGTAATCAGGAGACCCCATGGCTGAATCAGTGCCACAGAGCGAATCAAAGAGTTTGCAATTGA 1110 0.564 MTPPPPTPVDTSDSPATGGESQRSIPTPFLTKTYQLVEDQSIDDVISWNDDGSTFIVWNPTVFARDLLPKYFKHNNFSSFVRQLNTYGFRKVVPDRWEFSNDCFRRGEKRLLCEIQRRKISTPSPSPSPTAAGIATATVAVPSPMPLTAIPTAMPIISPSNSGDEQVISSSSSPSRAPAELLDENERLRKENVQLTKELAEMRSLCNNIFSLMSNYATTNAATTTTTNNSNSNQIDGSAQGSRDSAFTAVRPLDLMPVKRSSSGEPWTETATAMMVEEMNPKLFGVAIGAKRAREGGGGGGGEGGGGGGGGGSAGGREREEDTLLRLHQPGYADVKSEPLDCQNHRDNSSNQETPWLNQCHRANQRVCN* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g3092 369 PRINTS Heat shock factor (HSF) domain signature 29 52 IPR000232 GO:0003700|GO:0006355|GO:0043565
Ahy5g3092 369 PRINTS Heat shock factor (HSF) domain signature 67 79 IPR000232 GO:0003700|GO:0006355|GO:0043565
Ahy5g3092 369 PRINTS Heat shock factor (HSF) domain signature 80 92 IPR000232 GO:0003700|GO:0006355|GO:0043565
Ahy5g3092 369 MobiDBLite consensus disorder prediction 155 178 - -
Ahy5g3092 369 MobiDBLite consensus disorder prediction 224 244 - -
Ahy5g3092 369 PANTHER HEAT STRESS TRANSCRIPTION FACTOR B-2A 12 355 - -
Ahy5g3092 369 Gene3D - 21 119 IPR036388 -
Ahy5g3092 369 MobiDBLite consensus disorder prediction 294 354 - -
Ahy5g3092 369 ProSitePatterns HSF-type DNA-binding domain signature. 68 92 IPR000232 GO:0003700|GO:0006355|GO:0043565
Ahy5g3092 369 MobiDBLite consensus disorder prediction 12 26 - -
Ahy5g3092 369 MobiDBLite consensus disorder prediction 155 181 - -
Ahy5g3092 369 SMART hsfneu3 25 118 IPR000232 GO:0003700|GO:0006355|GO:0043565
Ahy5g3092 369 Pfam HSF-type DNA-binding 29 118 IPR000232 GO:0003700|GO:0006355|GO:0043565
Ahy5g3092 369 MobiDBLite consensus disorder prediction 1 26 - -
Ahy5g3092 369 SUPERFAMILY "Winged helix" DNA-binding domain 26 118 IPR036390 -
Ahy5g3092 369 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 12 355 IPR027725 -
Ahy5g3092 369 Coils Coil 185 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g3092 Ahy-Chr5 112591996 112593932 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g3092 1 369 HSF AT5G62020 44.271 2.44e-91 274
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Ahy5g3092 HSF_DNA-bind 1.20E-32 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g3092 K09419 - gmx:100812267 451.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g3502 15 157777741 157779684 Ahy5g3092 5 112591996 112593932 hybridization