Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g3085 ATGGGGTTTCTCCGGCGACTCTTCGGCGGCGGAGGAAAGAAGAACCACCACCATACTCCGCCGCCGGGAAAGGAAAAACGGAGCTGGAGCTTTGTGAAACAAAGCACCAGAGACAACAAATCCAACAACAATAACGGCTATGACAACTTCACCGACAACTTGGACCCCAACAGGCACGCCATCGCCGTCGCCGCCGCAACCGCCGCCGTAGCTGAGGCAGCTCTCGCAGCCGCACATGCCGCAGCAGAGGTTGTCAGGCTCACCAGCGGCGGCGGGGCCGCCACGCCGTCGCAGGTTCAACTCCGGCTGGCGGAGGAAATCGCCGCCGTGAAAATACAGTCGGCGTTCCGTGGTTACTTGGCAAGAAGGGCATTGAGAGCACTTAAAGCATTGGTGAAGTTACAAGCACTGGTGAGAGGCCACATTGTGAGGAAGCAGAGTGCGGATATGCTGAGGCGCATGCAAACTTTGGTGCGCCTCCAGGCTCGTGCACGTGCGAGTCGCGTGCACTTGTCTGACAACATGCCTTCTTTCAAGTCTTCACTTTCTCATTACCCTGTTCCTGAAGAGTATGAGTATCCACTTCGTGCCTATAGTACAAAATTTGATGGATCTTCTATCCTCAAGAGATGTTGTTCCAATTCAAATTTTAGGGACATCGAGTTAGAGAGAGCCCGATTCGGTTCCAGTTGGTTAGACAGTTGGATGGAACAAAGTGCATGGAGCCAAACTGGCAATGCTTCAAAGAAAAACGGGCACATAGATGACGAGAAGAGTGACAAGATTCTTGAAGTTGATACTTGGAAGCCACACATGAATTCTCACAATAACAGTAGCAGCTCATTCAAGGCACCACAACATTATTTCGCTCCAGATTACAGCGACAACTTTCTCATGGCATATGAATCTCCATCGAAACGTTCCTCGAAAGCGCTAAATACAAGTTTCTCATCTAGGGAAGTGTTGCCCTTAGGTTCTCCTAGATTCCACAAAGGAAAAGAAGTGGTGATGGCTTCAAGAACCGCAGAGAATAGTCCACAAGCATTTTCGGCCTCATCTAGGCTCAGTAATGGTGGAAGGAGAGGCCCTTTTACACCAACAAAGAGTGAGTGTTCTTGGGGTTTCTTCAATGGATATACTAGTCACCCAAGCTACATGGCTAACACTGAATCTTCAAGAGCTAAGGTTAGGTCACAAAGTGCTCCAAGGCAAAGGCTTGAGTTTGAGAGATATGGTTCAACAAGAAGGAGTTTTCAGAATCCTTGGGATGCAAGGCCTAATCCAAGTTCTGCCTCAAGCCAATTTAACTGA 1311 0.4935 MGFLRRLFGGGGKKNHHHTPPPGKEKRSWSFVKQSTRDNKSNNNNGYDNFTDNLDPNRHAIAVAAATAAVAEAALAAAHAAAEVVRLTSGGGAATPSQVQLRLAEEIAAVKIQSAFRGYLARRALRALKALVKLQALVRGHIVRKQSADMLRRMQTLVRLQARARASRVHLSDNMPSFKSSLSHYPVPEEYEYPLRAYSTKFDGSSILKRCCSNSNFRDIELERARFGSSWLDSWMEQSAWSQTGNASKKNGHIDDEKSDKILEVDTWKPHMNSHNNSSSSFKAPQHYFAPDYSDNFLMAYESPSKRSSKALNTSFSSREVLPLGSPRFHKGKEVVMASRTAENSPQAFSASSRLSNGGRRGPFTPTKSECSWGFFNGYTSHPSYMANTESSRAKVRSQSAPRQRLEFERYGSTRRSFQNPWDARPNPSSASSQFN* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g3085 436 Pfam IQ calmodulin-binding motif 129 146 IPR000048 GO:0005515
Ahy5g3085 436 Pfam IQ calmodulin-binding motif 108 126 IPR000048 GO:0005515
Ahy5g3085 436 MobiDBLite consensus disorder prediction 413 436 - -
Ahy5g3085 436 MobiDBLite consensus disorder prediction 7 52 - -
Ahy5g3085 436 PANTHER IQ-DOMAIN 5-RELATED 1 428 - -
Ahy5g3085 436 MobiDBLite consensus disorder prediction 340 363 - -
Ahy5g3085 436 Gene3D - 104 157 - -
Ahy5g3085 436 MobiDBLite consensus disorder prediction 34 52 - -
Ahy5g3085 436 SMART iq_5 127 148 IPR000048 GO:0005515
Ahy5g3085 436 SMART iq_5 104 126 IPR000048 GO:0005515
Ahy5g3085 436 PANTHER CALMODULIN-BINDING PROTEIN 1 428 - -
Ahy5g3085 436 Pfam Protein of unknown function (DUF4005) 345 421 IPR025064 -
Ahy5g3085 436 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 105 150 IPR027417 -
Ahy5g3085 436 MobiDBLite consensus disorder prediction 388 436 - -
Ahy5g3085 436 ProSiteProfiles IQ motif profile. 105 133 IPR000048 GO:0005515
Ahy5g3085 436 ProSiteProfiles IQ motif profile. 129 156 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g3085 Ahy-Chr5 112526202 112530884 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g3085 1 407 IQD Protein Family AT5G07240 45.863 1.50e-57 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g3085 - - adu:107491176 618.616