Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g3058 ATGGCACCTTCTCGGGTGGCTGGAGGATTGACCCAATCATCATCGAGTTCTGGAATTTTTTTTCAAGGAGATGCACAATCACATAGTGTAGTTAACTCTCCGTTAAACTCGCCATTCATTAACTCATCTAATGCGGTTCCTGGAACTGGTCTTCCAAACCTGGGTCCAGTGTCAGGGGATATGAACAATACAATTTTGAACAGTGCAGCAAACTCAGCTCCAAGTATTGGACCTAGCTCTTTACTCACAGATGCAAATTCAGCATTCGCTGGTGGGCTCCATTTGCCGAGAAGTGCAAGCATTAACACAGACTCATACTTACGGTTACCTGCTTCACCCATGTCATTTACATCAAATAATGTTAGTATTTCAGGGTCATCAGTTATGGATGGTTCGAATGTAGTACAACAGAGCTCTCACCAAGATCAGAATGCTCAACCATTGCAGCAGAATCAGCAGCAAGGAGCTTCTAGTGTTATGTCTACACCTGTGTCTCAAATTGGTCCTTCCCCACTTCAAATGGGTGCACAAATACCTGGATCTTTCATGCAAGATCCAAATAATTTATCTCAGCTGTCCAAAAAACCTAGGCTGGATATCAAGCAGGAGGATTTAATGCAACAGCAGGTGATACAGCAGCTTCTTCAGAGACAGGACCCCATGCAATTCCAGGGTCGTAATCCACAGATACAGGCCTTGATGCAACAGCAGCAAAGACTGAGGCAACAGCACATCCTTCAGTCAATGCCACAGTTACAGCGAGCACACTTACAACAACAGCAGCAGCAACAGCAACAAATGCACTTGAGGCAGCAGCAATTACAGCAACAATCAATGCAACCCATATCTGCGGTGAAGCGTCCGTATGACAGTAGCGTTAATGGTGTATGTGCTCGAAGATTAATGCAATACCTCTATCATCAAAGGCAACGACCAATTGAAAACACTATTGCTTATTGGAGAAAATTTGTGGCCGAGTATTACTCTCCTCGAGCAAGGGAACGGTGGTGCTTGTCTTTGTATAATAATGTTGGGCATCATGCACTAGGTGTTTTCCCTCAGGCATCTATGGATGCGTGGCAGTGTGACATATGTGGTTCTAAATCTGGAAGGGGATTTGAGGCAACTTTTGAAGTGCTCCCTAGACTTAGTGACATCAAATTTGGCAGTGGAGTTATCGATGAACTTTTATTTTTGGATTTGCCACGCGAACAAAGATTTCCTTCTGGTTTAATGATGTTAGAATATGCAAAAGCGGTTCAAGAGAGTGTATACGAGCAGCTTCGTGTTGTTCGTGAAGGTCACCTCCGTATTATATTTACACAAGACCTGAAGATATTATCTTGGGAGTTCTGTGCAAAGCGCCATGAAGAACTTCTTCCTAGAAGGTTGGTTGCACCACAGGTAAATCAGTTGGTTCAAGTAGCTCAAAAATGCCAGAGTACAGTTGCTGAAAGTGGTCCAGATGGGGTTTCTCAGCAAGATCTTCAAACAAACAGTAATATGGTATTGGCTGCTGGGCGTCAACTTGCAAAGAGTCTCGAGTTGCAATCAGTAAATGACTTGGGTTTTTCCAAAAGATATGTAAGATGTTTGCAGATTTCCGAGGTTGTTAATTCCATGAAAGATCTAATGGATATCTGTCGGGAGCACAAAATTGGGCCAATGGAGAGCTTGAAAAGTTATCCTCGTTTTGCAACCCCGGCCAAGCTTGAGAAGCAAAAAATTCATGAGATGGAACAGCTAGCAAATGCTCAAGGTCTGCCAACCGATCGAAACACACTCAACAAACTGATGGCACTGAATCCTGGTCTGAACAACCCAATAAACAATAATCTTAATATGGGGAATCGTGGTGCTTTGAGTGGGTCAGCACAAGCTGCTCTCACAATGTCTAACTACCAGAATCTTCTCATTAGGCAAAACTCAATGAATTCAAGCCCTGGCTCAATTCAGCGAGAAGGATCGTCATCTTTCAACAATGCGAACCAGAGTCCCTCTTCAGCTATGCAAGTTGCCGCTGCCTCTGCTTTTATTCCAGGCTCAATGCAGAATTCAGCCGGTTTCCCAAGTCCCCATCTACCCCCACAGCAGCGGCAGCAACACCTTCTACAGCGTTCAGCAAGTGCGAATGGTTTACTGCAACAAAACCATTCACAGGGATCCCAAGGAAATCAAGCTCTACAGCAGCAGATGATCCAGCAACTGCTGATGTCAAATAACAATGGGGGAGTACAATCACAATCTCTTAGTGGACCCAATGCAAATGGGAACATAGCAAAGAATGGGTTGAGTTTTGGAGGCCACTCTCCTACTCCTTCCATAACCGGAGGATCTATCAATGTTTCAGGAAACAACGGCCCTGTTTCAAGGAGTAATAGCTTCAAAGTGGCCTCCAACAGTGATTCTTCTGCAGCGGGCGGCAACAATGGTATCAACCAGAGAACGCCAGATATGCCGCAAAATATCCTTTTGCAAGATGTGGTTCCGGATATTGTCAGTGATTTCACTGATAGTCCCTTCTTCAATAGTGATCTAGATGATAACATGGGTTTTGGCTGGAAGGCATAA 2571 0.443 MAPSRVAGGLTQSSSSSGIFFQGDAQSHSVVNSPLNSPFINSSNAVPGTGLPNLGPVSGDMNNTILNSAANSAPSIGPSSLLTDANSAFAGGLHLPRSASINTDSYLRLPASPMSFTSNNVSISGSSVMDGSNVVQQSSHQDQNAQPLQQNQQQGASSVMSTPVSQIGPSPLQMGAQIPGSFMQDPNNLSQLSKKPRLDIKQEDLMQQQVIQQLLQRQDPMQFQGRNPQIQALMQQQQRLRQQHILQSMPQLQRAHLQQQQQQQQQMHLRQQQLQQQSMQPISAVKRPYDSSVNGVCARRLMQYLYHQRQRPIENTIAYWRKFVAEYYSPRARERWCLSLYNNVGHHALGVFPQASMDAWQCDICGSKSGRGFEATFEVLPRLSDIKFGSGVIDELLFLDLPREQRFPSGLMMLEYAKAVQESVYEQLRVVREGHLRIIFTQDLKILSWEFCAKRHEELLPRRLVAPQVNQLVQVAQKCQSTVAESGPDGVSQQDLQTNSNMVLAAGRQLAKSLELQSVNDLGFSKRYVRCLQISEVVNSMKDLMDICREHKIGPMESLKSYPRFATPAKLEKQKIHEMEQLANAQGLPTDRNTLNKLMALNPGLNNPINNNLNMGNRGALSGSAQAALTMSNYQNLLIRQNSMNSSPGSIQREGSSSFNNANQSPSSAMQVAAASAFIPGSMQNSAGFPSPHLPPQQRQQHLLQRSASANGLLQQNHSQGSQGNQALQQQMIQQLLMSNNNGGVQSQSLSGPNANGNIAKNGLSFGGHSPTPSITGGSINVSGNNGPVSRSNSFKVASNSDSSAAGGNNGINQRTPDMPQNILLQDVVPDIVSDFTDSPFFNSDLDDNMGFGWKA* 857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g3058 856 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 160 855 - -
Ahy5g3058 856 MobiDBLite consensus disorder prediction 644 667 - -
Ahy5g3058 856 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 5 150 - -
Ahy5g3058 856 Coils Coil 257 277 - -
Ahy5g3058 856 MobiDBLite consensus disorder prediction 127 165 - -
Ahy5g3058 856 MobiDBLite consensus disorder prediction 683 703 - -
Ahy5g3058 856 Pfam LIM-domain binding protein 300 560 IPR029005 -
Ahy5g3058 856 MobiDBLite consensus disorder prediction 743 818 - -
Ahy5g3058 856 PANTHER LIM DOMAIN-BINDING PROTEIN 5 150 IPR029005 -
Ahy5g3058 856 PANTHER LIM DOMAIN-BINDING PROTEIN 160 855 IPR029005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g3058 Ahy-Chr5 112268694 112273255 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g3058 281 569 C2H2 Transcription Factor Family AT1G43850 57.439 5.38e-108 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g3058 - - gmx:100816886 1189.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g3468 15 157405454 157411015 Ahy5g3058 5 112268694 112273255 hybridization