Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g3049 ATGTCTTTAAAAATTCTTCAGACAACATTTTCTTCTTCTTCTTCTTCGCTTCTTGTTCCAAATTCCATGGCGCTCTCTCTCTCTCACAGTCCTCTTCGTTTTCCATGTTCTCATTCTTCTCTCAAACCGAAGCTCGCTTTATCTCTCCCTCGCTCTTCTTTCTCACCCACTCTCTCCTTCTCTCCTGCTTCCAATGTCAAGTTCACCACTGCCACACCAAGTGCCTACGTCACAGGCCCCGGCTCGGATCCAATCTTCGCTGAACTGGATCCAAAGCTTGACGGGTCGGGTCAGGATAAACCCAACACCCCACCCAAGGTCATAAGCTGGGGGTTGCTATGGATGCTTCTCATGAAGCACAAGCTGAGGCTGATTCTTTCGCTTGCAACTCTCATTGCTTGCTCCACATGCACTCTTTCCATGCCCATTTTTTCTGGGCGGTTTTTTGAAGTCCTTATTGGTGTTAGACCAGAGCCATTGTGGAAGTTGCTCAGTCAAATTGGAGTGCTGTATGCAATGGAGCCACTTTTAACCGTTATTTTTGTTGTAAACATGAACACTGTATGGGAGAAAGTTATGTCAACTCTTAGAGCTCAGATCTTTGGCAGAATATTGATTCAAAAGGTTGAATTTTTCGACAAATACAAGGTTGGAGAACTCACTGGTTTGTTAACATCTGATCTGGGTTCCCTTAAAGATATTGTGAGCGAGAATGTCTCAAGGGATCGCGGTTTCAGGGCATTATCTGAGGTCATTGGGACAATATTCATTCTTTTTTCTTTATCCCCTCAGCTAGCCCCACTTCTTGGTATTCTGATGCTCACGGTTTCTGTCTCAGTCGCTGTCTACAAGAGATCAACATTTCCTGTTTTCAAAGCACATGGGTTGGCCCAAGCATCAATAGCTGATTGTGTATCAGAAACATTCTCTGCTATTCGAACAGTAAGATCTTTTGGTGGTGAAAAGCGGCAGATGTTTACATTTGCTAAACAGGGTGAGCTCTCTGTCGGAGCTATGGCATCTTTTATTGGATATACTTTCACTTTAACATTTGCTGTTCAAGGACTGGTTAATACCTTTGGGGATCTTCGAGGAGCTTTTGCGGCCGTTGACAGGATCAACTCTGTTTTATCTGGAGTTCAAGTTGATGATTCTCTTGCCTATGGCTTAGAAAGAGAACTAAGGCAACAGAAAGCAGTGGATGATGAGAAATATAAATTATTCTTCTCTAATAGTTCAACTGAGAAAAACCAAATGCATTACATGTCGGCACTAAAAACATCTAGCAATTTGTTTAGCTTGGCTTGGTCTGGAGATGTTTGTCTTGAAGATGTCTATTTCTCTTATCCTTTAAGGCCAGATGTGGAAATCTTACGTGGGTTAAATTTAAAACTAAATTGTGGAACTGTAACTGCACTGGTAGGTTCTAGTGGCGCAGGCAAAAGTACCATAGTGCAGCTATTGGCTAGATTCTATGAGCCAGCAAGAGGTTGCATAACGGTTGCGGGAGAGGATGTAAGAACATTTGACAAGAGCGAATGGGCCCGGGTTGTCTCTATTGTAAATCAAGAGCCTGTTCTCTTCTCGGTGTCGGTTGGAGAAAATATTGCATATGGTCTTCCAGATGAGAATGTTTCTAAGGAGGATGTCATTAAGGCAGCAAAAGCTGCCAATGCTCATGATTTTATCATCTCACTTCCACAGGGCTATGATACACTTGTTGGTGAGCGTGGAGGCCTATTGAGTGGAGGACAGAGGCAGAGAATCGCCATAGCCCGAGCTATCTTAAAGAATGCTCCAATCCTTATACTGGACGAGGCCACGAGTGCGCTGGATGCTGTCAGCGAGCGGCTGGTACAAGAAGCTCTCAACCATTTGATGAAAGGGAGGACGACACTAGTTATAGCTCATCGATTAAGCACGGTTCAAAATGCTCATCAAATTGCGCTTTGTTCCGAAGGGAGGATCGCGGAACTAGGCACACATTTTGAGCTATTGGCTAAGAAGGGCCAATATGCTTCCCTGGTTAGCACTCAGAGGCTTGCATTTGAATGA 2055 0.4404 MSLKILQTTFSSSSSSLLVPNSMALSLSHSPLRFPCSHSSLKPKLALSLPRSSFSPTLSFSPASNVKFTTATPSAYVTGPGSDPIFAELDPKLDGSGQDKPNTPPKVISWGLLWMLLMKHKLRLILSLATLIACSTCTLSMPIFSGRFFEVLIGVRPEPLWKLLSQIGVLYAMEPLLTVIFVVNMNTVWEKVMSTLRAQIFGRILIQKVEFFDKYKVGELTGLLTSDLGSLKDIVSENVSRDRGFRALSEVIGTIFILFSLSPQLAPLLGILMLTVSVSVAVYKRSTFPVFKAHGLAQASIADCVSETFSAIRTVRSFGGEKRQMFTFAKQGELSVGAMASFIGYTFTLTFAVQGLVNTFGDLRGAFAAVDRINSVLSGVQVDDSLAYGLERELRQQKAVDDEKYKLFFSNSSTEKNQMHYMSALKTSSNLFSLAWSGDVCLEDVYFSYPLRPDVEILRGLNLKLNCGTVTALVGSSGAGKSTIVQLLARFYEPARGCITVAGEDVRTFDKSEWARVVSIVNQEPVLFSVSVGENIAYGLPDENVSKEDVIKAAKAANAHDFIISLPQGYDTLVGERGGLLSGGQRQRIAIARAILKNAPILILDEATSALDAVSERLVQEALNHLMKGRTTLVIAHRLSTVQNAHQIALCSEGRIAELGTHFELLAKKGQYASLVSTQRLAFE* 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g3049 684 SMART AAA_5 467 661 IPR003593 -
Ahy5g3049 684 PANTHER ABC TRANSPORTER B FAMILY MEMBER 28 330 682 - -
Ahy5g3049 684 SUPERFAMILY ABC transporter transmembrane region 113 378 IPR036640 GO:0005524|GO:0016021
Ahy5g3049 684 Pfam ABC transporter transmembrane region 124 325 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Ahy5g3049 684 PANTHER ABC TRANSPORTER B FAMILY MEMBER 28 64 331 - -
Ahy5g3049 684 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 330 682 IPR039421 -
Ahy5g3049 684 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 125 358 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Ahy5g3049 684 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 64 331 IPR039421 -
Ahy5g3049 684 Gene3D ABC transporter type 1, transmembrane domain 175 437 IPR036640 GO:0005524|GO:0016021
Ahy5g3049 684 Pfam ABC transporter 458 609 IPR003439 GO:0005524
Ahy5g3049 684 ProSitePatterns ABC transporters family signature. 581 595 IPR017871 GO:0005524
Ahy5g3049 684 Gene3D - 438 681 IPR027417 -
Ahy5g3049 684 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 440 678 IPR003439 GO:0005524
Ahy5g3049 684 CDD ABC_MTABC3_MDL1_MDL2 442 679 - -
Ahy5g3049 684 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 432 679 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g3049 Ahy-Chr5 112064233 112069796 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g3049 140 684 Calmodulin-binding Proteins AT2G36910 34.364 1.05e-75 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g3049 K05657 - gmx:100791034 1011.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g3452 15 157102186 157107722 Ahy5g3049 5 112064233 112069796 hybridization