Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g3042 ATGGGGAAAGGAGGGATGTCAGTAGATGATGATCATGGAGAAGAGCAGAACTTGGCTGCTTGGCTTGTTGCCATTAACACACTCAAGATTCAGCCATTCAACCTTCCTCCTCTTGGACCCCATGATGTTAGAGTTAGAATGAAAGCTGTTGGTATATGTGGAAGTGATGTTCACTACCTCAAGACACTGAGATGTGCACACTTTGTAGTTGAAGAGCCAATGGTGATTGGTCATGAGTGTGCTGGGATCATTGAAGAAGTTGGCAGTGAGGTCAAGGCCTTGGTGCCAGGTGACCGTGTGGCGATTGAGCCAGGAATCAGTTGCTGGCGTTGCGACCACTGCAAGCAGGGTCGCTATAACTTGTGCCCTGATATGAAGTTCTTTGCCACTCCACCAGTTCATGGTTCCCTTGCTAATCAGATAGTGCACCCTGCAGACCTATGTTTTAAACTACCAGACAATGTAAGCTTAGAGGAGGGGGCAATGTGTGAGCCCTTAAGCGTCGGTGTTCATGCTTGTAGGCGTGCTGAGATTGGCCCAGAAACAAAGGTGTTGATCATGGGAGCTGGACCTATAGGACTTGTTACGATGCTTGCGGCTCGAGCTTTTGGTGCACCTAGGATTGTCATAGTGGATGTCGATGACCATCGTTTATCTGTTGCAAAATCTCTTGGTGCTGATGATATTGTCAAAGTCTCAACAAACTCCCAGGATGTTCCTGGAGAAGTTGAACAGATACATAAGGCTATGGGAGCTGATGTAGATGTTACCTTTGACTGTGCCGGTTTCAACAAAACCATGACTACAGCACTGAGTGCTACTAAGCCAGGTGGCAAAGTTTGCTTAGTGGGAATGGGTCATTCTGAAATGACAGTCCCACTCACCCCAGCCGCTGCAAGGGAAGTTGATGTGATTGGTATATTCCGGTATAAGAACACATGGCCTCTATGTCTTGAGTTTCTAAGGAGTGGCAAAATCGATGTGAAGCCCCTTATAACACACAGGTATGGATTCTCTCAGAAGGAAGTGGAAGAAGCGTTTGAAACAAGTGCTGCTGGTGGTAATGCTATTAAGGTCATGTTCAATCTTTAG 1092 0.467 MGKGGMSVDDDHGEEQNLAAWLVAINTLKIQPFNLPPLGPHDVRVRMKAVGICGSDVHYLKTLRCAHFVVEEPMVIGHECAGIIEEVGSEVKALVPGDRVAIEPGISCWRCDHCKQGRYNLCPDMKFFATPPVHGSLANQIVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRAEIGPETKVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDHRLSVAKSLGADDIVKVSTNSQDVPGEVEQIHKAMGADVDVTFDCAGFNKTMTTALSATKPGGKVCLVGMGHSEMTVPLTPAAAREVDVIGIFRYKNTWPLCLEFLRSGKIDVKPLITHRYGFSQKEVEEAFETSAAGGNAIKVMFNL* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g3042 363 Pfam Zinc-binding dehydrogenase 191 321 IPR013149 -
Ahy5g3042 363 Pfam Alcohol dehydrogenase GroES-like domain 40 151 IPR013154 -
Ahy5g3042 363 Gene3D - 27 349 - -
Ahy5g3042 363 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 154 327 IPR036291 -
Ahy5g3042 363 SMART PKS_ER_names_mod 23 361 IPR020843 GO:0016491
Ahy5g3042 363 CDD sorbitol_DH 19 362 IPR045306 GO:0016616
Ahy5g3042 363 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 77 91 IPR002328 GO:0008270|GO:0016491
Ahy5g3042 363 PANTHER L-IDONATE 5-DEHYDROGENASE 10 363 - -
Ahy5g3042 363 PANTHER SORBITOL DEHYDROGENASE 10 363 - -
Ahy5g3042 363 Gene3D - 168 308 - -
Ahy5g3042 363 SUPERFAMILY GroES-like 18 189 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g3042 Ahy-Chr5 111988976 111991657 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g3042 30 296 Monolignol Biosynthesis Gene Families AT4G37980 28.058 7.47e-19 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g3042 K00008 - gmx:100791559 675.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g3446 15 157047463 157050098 Ahy5g3042 5 111988976 111991657 hybridization