Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g3035 ATGGGAAAGGATTGGTATTGGTCTAGTAGATCTTCCAAGAGAAGTAGTAGTGCTACAACAACAATATCACAAGTTGAACCACCACCACCACCACCACCTCCTTCCGGTTGCATGTGTGCCGTCTTTCACTTGTTTCATTTCCATCCATTTCATCCCTTCCCTACCACCGCCGCCGTACATCACCAACAAAAGTCATCACCACAGGATCTTCCCCTTCCCCAAGCACCTAGGAATAGCTTGGAAGAATCACACCATCTTTCTACTACACAACCTCCTTCACATCTCATCGAACAACAACACTTCAAAATTCCAAAGAAGATACAAGTAATGAAAACAAGTAGTGAAGTTGACATGTGTTGTTCATCAGTGGAATCTCCGGGGACATCAGCAAAGACACCAACATTAGTAGCAAGGTTGATGGGTCTTGATCTTCTACCTCCACCTTCTTCAAACTTGTCATCACCCTCTTGTTCATCTTCATCATGCATTTCCACACCAAATCTGCACCTCTTATCCAAACACAGGAACAGCACTGATTGTGTTATTGTTGATCACTCCTCACCAAGAACAAGATCAGATCTTGACTACTATCACCACAGGCTCTCCCTCCAAATCAACACCAACACCAACAAGGACGAGGATTTGGAGATGATGCGCTTCTCATCATCATCATCATCATTACTCTCAAAAAGGAACAACCACTTTGATGACAACCATAATAATAGTGTCTCTAATGGCAGAACAAGTTCTTCTTCTTCATCATCATCACCAAGCCATTTGGCAAGGCAAATTGTGAAGCAAGTTAAGAAGAATGTGATGATGAACAGTGGTAGAAAAGTTGGACAAGACATCACCAACACAATCAAACAAAGAGAACAACAACCTGTTACCCAAATCAAACTTAAAAAGAAACTTTCTTCCAAGCCATCATCACCATCACTTGATAATCATCATGATTCAAACTCATTATCTTTTTCTCCAAGGTTAAGGTTCATAGAAACCAAAAACAACAGCCATAAGCCACCAGCTGCTCCACCATCACCACCACCACCACCACCACCTCCACAACAAGTGGAAGAGCTTCCAAGAGTTTTGATAAGGCCAAAGGAAGAAGGGTCGTTGCAGCAGAATCAGAAATCATCATCATCGTCAGTGGCAAAATGTAATAAGAAGGTGAACAATGAAAAGTTCAGCTCAGCATCAAGGCTCAAAAAGCAAGAGGAGCCATTCATAGTTCGACCAACTTCACCACCAACAACTAGAACCGGTGACATCATCATCAAGAATGCCACAAAAACCCATCATAAGAAGACTCATCCATTGTCCAACAATCTTCTCAATAACATCAACACTGTCGTCCCCAACCTTTTCCCTATCAAGACTGAAGCTTCTCCTCCACCAACCAAAATTAATCACAATAAGAAGCAGTCAGAGGTATGTGACAAAAGTAGCCCCCAACAGTTATCTAGTTCTTGGAGCCATCATCACAGTCACAGGTACAAACAAGAAGGGATAATAAGCACACTCGCCACCCGAGATTTCAGCACAAACGACATCGTTCAAGCCAAAAGCACTAACCAGAATAATGCATATTCATCATCATCCACCACCGGAGAAGAACTTGCAGCAGCAGCAGCTGAATCTGAACATCACGGACCAGAATTTCAGTATATCACAGGAATCCTAAGCCGTACTTTCAACAAGGAAGAACAACATGCCACAACAACAGGTCAACGCTTCTTTCATGACCTCGAAGAACACCCAATTTTGAATTCCCATGTTTCCACTCCCGAAAACGTTAAAGATTGCATCTTTTCGATGAAACAAAAACTGGGTCTGCGCTGGAATCGGAGGTTGATGTTTGACTTGGTGGATGAGGTGTTAATGGAGGTTCTTAGGCCTATAAAAAGCGAAGAAAAGAGTAGGCTTTGGTTTTTGCATGGGCGTTGTTGTTATTACCAAGGGAAGGTTGAAGGATTAATGGAGAGAGTGTGGAAGAGGATAGGGAAGTTCCCATGCAAGAGGTGTGAGTTTTTGGAGGACATTGATTGGTTGATAGAATCAGAGGACATGGAGAAGGTGAAGGTGGATGTTGAAGAAGGTTTGGAGGAAGAAGGAGAAAGGTTGGTGGCAGAGATTGAAGGGAACATATGGAACACATTAGTGCATGAATCCCTTATGGTTATGATCACTGCCTGCTATTAG 2205 0.4272 MGKDWYWSSRSSKRSSSATTTISQVEPPPPPPPPSGCMCAVFHLFHFHPFHPFPTTAAVHHQQKSSPQDLPLPQAPRNSLEESHHLSTTQPPSHLIEQQHFKIPKKIQVMKTSSEVDMCCSSVESPGTSAKTPTLVARLMGLDLLPPPSSNLSSPSCSSSSCISTPNLHLLSKHRNSTDCVIVDHSSPRTRSDLDYYHHRLSLQINTNTNKDEDLEMMRFSSSSSSLLSKRNNHFDDNHNNSVSNGRTSSSSSSSSPSHLARQIVKQVKKNVMMNSGRKVGQDITNTIKQREQQPVTQIKLKKKLSSKPSSPSLDNHHDSNSLSFSPRLRFIETKNNSHKPPAAPPSPPPPPPPPQQVEELPRVLIRPKEEGSLQQNQKSSSSSVAKCNKKVNNEKFSSASRLKKQEEPFIVRPTSPPTTRTGDIIIKNATKTHHKKTHPLSNNLLNNINTVVPNLFPIKTEASPPPTKINHNKKQSEVCDKSSPQQLSSSWSHHHSHRYKQEGIISTLATRDFSTNDIVQAKSTNQNNAYSSSSTTGEELAAAAAESEHHGPEFQYITGILSRTFNKEEQHATTTGQRFFHDLEEHPILNSHVSTPENVKDCIFSMKQKLGLRWNRRLMFDLVDEVLMEVLRPIKSEEKSRLWFLHGRCCYYQGKVEGLMERVWKRIGKFPCKRCEFLEDIDWLIESEDMEKVKVDVEEGLEEEGERLVAEIEGNIWNTLVHESLMVMITACY* 735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g3035 734 MobiDBLite consensus disorder prediction 80 96 - -
Ahy5g3035 734 MobiDBLite consensus disorder prediction 238 262 - -
Ahy5g3035 734 MobiDBLite consensus disorder prediction 58 73 - -
Ahy5g3035 734 Pfam DUF761-associated sequence motif 121 147 IPR032795 -
Ahy5g3035 734 PANTHER LOW PROTEIN: M-PHASE INDUCER PHOSPHATASE-LIKE PROTEIN 1 730 - -
Ahy5g3035 734 MobiDBLite consensus disorder prediction 341 358 - -
Ahy5g3035 734 MobiDBLite consensus disorder prediction 8 23 - -
Ahy5g3035 734 Pfam Domain of unknown function (DUF4378) 554 724 IPR025486 -
Ahy5g3035 734 MobiDBLite consensus disorder prediction 458 500 - -
Ahy5g3035 734 MobiDBLite consensus disorder prediction 371 396 - -
Ahy5g3035 734 MobiDBLite consensus disorder prediction 371 423 - -
Ahy5g3035 734 MobiDBLite consensus disorder prediction 1 32 - -
Ahy5g3035 734 MobiDBLite consensus disorder prediction 278 332 - -
Ahy5g3035 734 MobiDBLite consensus disorder prediction 58 99 - -
Ahy5g3035 734 MobiDBLite consensus disorder prediction 227 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g3035 Ahy-Chr5 111891182 111894456 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g3035 113 725 TRM (TON1 Recruiting Motif) Superfamily AT5G62170 28.720 1.06e-28 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g3035 - - aip:107644757 1159.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g3439 15 156955395 156958701 Ahy5g3035 5 111891182 111894456 hybridization
Ahy5g3035 5 111891182 111894456 Ahy19g3516 19 157869343 157872331 PCT
Ahy5g3035 5 111891182 111894456 Ahy9g2112 9 109886472 109889305 PCT
Ahy19g3516 19 157869343 157872331 Ahy5g3035 5 111891182 111894456 PCT
Ahy9g2112 9 109886472 109889305 Ahy5g3035 5 111891182 111894456 PCT