Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g3024 ATGCCCTCCCGCCAACTCCTCCCTCACCGCCGCCACCACCACCACCGCAGTATCCTTCTCCCGCTTATCACTGCCACCGCCGCCTCCCTCCTTCTCCTCGTTCTCTTCCTCCTCTTCCTCCGCCGTCGCAAGCGCACCTCCCCGTCCACCACCTCCAACGCCGGAGACGACTCCAAGCCCCCCCACCGTCTCTCCTACACCCTCCTTCGCCGTGCCACCAACTCCTTTTCTTCCCCACTGGGCCATGGTGGCTTCGGAACCGTCTTCTCCGGCACCCTCCCTACTCCGGCGAGAACCCCCGTCGCAGTGAAACTCATGGACCCCACAACAACCTCGCAGCAAGGCGAGCGCGAGTTTCACAACGAGCTCTTCTTCGCCTCCGTGCTCCGCCAATCTCCCCACGTCGTCGCCGCCGTGGGATTCTCATCGGACCCAAAACGGCGCCGTTTCCTCCTCGTCTACGACCTCATGGTAAACGGAAATCTCCAAGACGCTTTATTGCATAGAAAGTGCCCTGAACTCATGCAGTGGAACAAGCGCTTCTCTGTTGCATTGGACATAGCAAAAGGTGTTCTTTTCCTTCATAGTTGTGACCCCCCTGTGATTCATAGTGATATTAAGCCCAGCAATATTCTCCTCGATGCTGAATTCAATGCCAGAATTGGGGATTTTGGACTTGCCCGTTTGAAATCGGATCCCAATTTGGATGTTTTGGATGGTAGGGGTGATTTTGAGAAGAAAAAGGAGGGGTTTTTGGAGTGTGATGGTGGTGGGGTTGTTGTTGCCGTGGATGATTGTGAAACGGAAAGTGTGAACACTGGTTGTTACTTTGAGGAGGGTAGCTTGGGTGTGGATCAATCTCCTGAGTGTTTTGTTAAGGTGCCCAACTTGGAGACCTCGCCGGAGACTAGTGGGGCTGGTGTGTCGGCCTCACCGGAGATGGCAGTAACATTGGCGGGGGCGGCGTCTCTGTCGCCGGGGTTTGACAAGGCTAGCAGTGCTCAGAGTGAGAAGGGTGTTAAGAAGAATGGGAAAGGGATGAGGAGTAATTCAGTGAGGGATTGGTGGTGGAAGCAGGACAATGAGGAGGTTGCAGCCTCAGGATCAGGATCAAATCCTGTTGGGGAGAGTAAGACGGTGAAGGATTATGTGATGGAGTGGATTGGGAGGGATGTTGATAAGGAAAGGCCAAAGGGCGAATGGGTTGGAGGAGAAGGTGGGCAATTGGGGAAGCAAGAGAAGAAGAAAATGAAGAAGAAGAAGAGTAGGAAGCACCAATTGGAATGGTGGGAATCAATGGAGGAGGAGAAGTTTGATGATGTTCTAAAGAAGGAGAAGAGGAGGCCGGCGAGAGAGTGGTGGAAGGAGGAGTACGGTGAAGAGCTCGAAAAGAAGAAGAAGAAGAAGAAAAAGAGGAAGGGATTGAACAGCGATGATGATGATGGCAATGGGAGTGAGTGGTGGGTGAGCGATGATGTTTTGTATGGGGATAGGAATTTGAAGAAGGCCAAGAGCAAGAGCAGGAATAACCGTGGAGGCACAGATTGGTGGTTGGAGGGGCTAAGTGGCGACTTATGGAGAACTCGCCGGAACAGCTTCGATTCAGCTAGTGGAGAAATTCCAAAGAGTGGTGGTGTGAGTAGTACTCCAAGCATGAGGGGCACCGTTTGTTATGTTGCTCCGGAGTATGGCTACAGCGGAGATGTCTCAGAGAATTGTGATGTATATAGTTTTGGTGTCTTGTTGCTAGTTATCATTTCAGGGAGGCGACCCCTTCAGGTGAACGGTTCGCCATTGTCCGAGTTTCACCGTGCAAATCTGTTGTCTTGGGCGCGACATTGCGCTAGAAATGGGAAGCTCGTCGAGCTGGTTGATCAGTCTATTCAGTCATTAGATAAGGATCAGGCTCTTCTATGTATCAAGGTGGCTTTGCTTTGTGTGCTTAAGTCCCCTGCTCGCCGCCCTTCGATGAAAGAGGTTGTGGGAATGCTTTCCGGGGAGTTGGAGCCACCCCAATTGCCCATTGAATACTCGCCTTCGACCCCTTCTCGATTCCCATTCAAGACCCGGAAGAAAGGCCGGTGA 2085 0.5257 MPSRQLLPHRRHHHHRSILLPLITATAASLLLLVLFLLFLRRRKRTSPSTTSNAGDDSKPPHRLSYTLLRRATNSFSSPLGHGGFGTVFSGTLPTPARTPVAVKLMDPTTTSQQGEREFHNELFFASVLRQSPHVVAAVGFSSDPKRRRFLLVYDLMVNGNLQDALLHRKCPELMQWNKRFSVALDIAKGVLFLHSCDPPVIHSDIKPSNILLDAEFNARIGDFGLARLKSDPNLDVLDGRGDFEKKKEGFLECDGGGVVVAVDDCETESVNTGCYFEEGSLGVDQSPECFVKVPNLETSPETSGAGVSASPEMAVTLAGAASLSPGFDKASSAQSEKGVKKNGKGMRSNSVRDWWWKQDNEEVAASGSGSNPVGESKTVKDYVMEWIGRDVDKERPKGEWVGGEGGQLGKQEKKKMKKKKSRKHQLEWWESMEEEKFDDVLKKEKRRPAREWWKEEYGEELEKKKKKKKKRKGLNSDDDDGNGSEWWVSDDVLYGDRNLKKAKSKSRNNRGGTDWWLEGLSGDLWRTRRNSFDSASGEIPKSGGVSSTPSMRGTVCYVAPEYGYSGDVSENCDVYSFGVLLLVIISGRRPLQVNGSPLSEFHRANLLSWARHCARNGKLVELVDQSIQSLDKDQALLCIKVALLCVLKSPARRPSMKEVVGMLSGELEPPQLPIEYSPSTPSRFPFKTRKKGR* 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g3024 694 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 8 694 - -
Ahy5g3024 694 ProSitePatterns Serine/Threonine protein kinases active-site signature. 201 213 IPR008271 GO:0004672|GO:0006468
Ahy5g3024 694 MobiDBLite consensus disorder prediction 671 694 - -
Ahy5g3024 694 ProSitePatterns Protein kinases ATP-binding region signature. 80 104 IPR017441 GO:0005524
Ahy5g3024 694 MobiDBLite consensus disorder prediction 326 354 - -
Ahy5g3024 694 Gene3D Transferase(Phosphotransferase) domain 1 530 671 - -
Ahy5g3024 694 MobiDBLite consensus disorder prediction 395 426 - -
Ahy5g3024 694 PANTHER OS07G0586332 PROTEIN 8 694 IPR044576 -
Ahy5g3024 694 Gene3D Transferase(Phosphotransferase) domain 1 60 246 - -
Ahy5g3024 694 SMART serkin_6 74 664 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy5g3024 694 Pfam Protein tyrosine and serine/threonine kinase 77 231 IPR001245 GO:0004672|GO:0006468
Ahy5g3024 694 SUPERFAMILY Protein kinase-like (PK-like) 57 684 IPR011009 -
Ahy5g3024 694 ProSiteProfiles Protein kinase domain profile. 74 673 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g3024 Ahy-Chr5 111666076 111668741 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g3024 549 671 Receptor kinase-like Gene Family AT2G43700 33.871 5.35e-14 73.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Ahy5g3024 PK_Tyr_Ser-Thr 2.50E-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g3024 - - lja:Lj2g3v0473820.1 807.749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g3426 15 156708376 156711195 Ahy5g3024 5 111666076 111668741 hybridization
Ahy5g3024 5 111666076 111668741 Ahy19g3507 19 157755002 157757051 PCT
Ahy5g3024 5 111666076 111668741 Ahy9g2129 9 110180449 110185204 PCT
Ahy19g3507 19 157755002 157757051 Ahy5g3024 5 111666076 111668741 PCT
Ahy9g2129 9 110180449 110185204 Ahy5g3024 5 111666076 111668741 PCT