Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g3010 ATGGACCAATCAATTTGTGAAGAAGTATCATATGACACTGCATATGATGTGAGTGATCATTATAATTTTACCGACGTTAATGTTCTGTCGCTTAGTGAAGATGACACACAACATGTGGACAAGGGGAAAGAATTTGTAAACGTTATTCAATTAGAGGATGATGCAATGGCAGTGAATCATGAGTTACTCGATCACACTGGAATTCCAATAGAGAAAATCTCGTACGTAGGATTGAGATTTGTTTTCTTGCAGCGGGCACAAGAGTTCTATTCTAATTATGCAAAGAAAGTTGACTTCGTGACTAGGATTAGGAATACCAACTTTGACAAGACCAGGAAGGAATCAAAGATACCCATTAACCAATCGATACACTGTAGTCGTGAAGGTTATCAGGAGTCTCGGGTGAAGGCAGCAACTCGGGTAAAGAGAATAACAACAGCTGGATGCAAAGCAAGGATGCACACGATGCTTGATAGGCAGAAGGATAATTGGATGGTGTCCAAATTAGAATTGAAGCACACCCACCCGTGTTCTGCCAAACAAGCTGTGCATTACACTGAGTACAGGGAACTGATCATGCATGCCAAGTGTGAGATTCAAAATAACGATGAGGCTGGCATATGGCCCAACAAGACTTATCTCGCACTGGAGAATGAGTTTAGTGGCTCATCGAATTTGGGTTACTCAGAAAAGGATATGAGTAACTACATTACAAGCAATCTGCGCTGTGCTGATGAAAACACAGATGTGAAAGAAATGATTAGCTATTTCATGCGAATGAAAGATATTAACCCAAATTTCTTTTATGCAGTTGATATGGCTGAAGCTAACAAGTTTAAGAGTGCGTTCTGGGTAGATGCAAGATGCAAGACGTCCTATGAATATTATGGTGACGTGGTATCGTTTGATATAACATACAATAGAAACATGCACAGACTTCTATTTGCATCTTTTGTTGGTGTCAATCATCATGGCAAGTCCACTCTGCTCGGATGTGCTTTGCTGGCCATCATCATGGACCAGTGCAAATCCATGTTTGTTGCTATTAGGAATGTCCTTCCAGATATTCGCCACCAATGGTGCATATGGCACATACTGAAGAAGATACCGCATAAGTTTGGAGGATATGCTTGGTACAGAGAAATAGAAGCTAGAATGCATGGCACTGTTTGGAATGCCAGGTCTATGGAATCTTTCGAGAAGGATTGGTCTGCAATCATTTTGTATTGTGATCTTATATTCTTCTTTTATAGTAGGTTTACCTTTATGACGATTGTTGAATATGGGTTCCAATCTATTTTCAAGGTGAATTTTGGGCTGGTCGTTCATGAGTATGACAATGTGCTTGGGAACAAGGAGCAGAAGGAACTGGAGGATGATTATGCAGACTTTAAAGGAGTTTTTCCCTGTTCATCGAGCTCTACAATTGAAAGTCAATTTCAGCATGAGTACACAACCTATAAGTTTAAGGAAGTACAACAGGAATTTAGGAAAAGAATGGATTGTTTAGTCCGTGGTGTGACTCAAGAGGGTGATTTGTTTCGTGTGACCATGAACGAGTAA 1563 0.4018 MDQSICEEVSYDTAYDVSDHYNFTDVNVLSLSEDDTQHVDKGKEFVNVIQLEDDAMAVNHELLDHTGIPIEKISYVGLRFVFLQRAQEFYSNYAKKVDFVTRIRNTNFDKTRKESKIPINQSIHCSREGYQESRVKAATRVKRITTAGCKARMHTMLDRQKDNWMVSKLELKHTHPCSAKQAVHYTEYRELIMHAKCEIQNNDEAGIWPNKTYLALENEFSGSSNLGYSEKDMSNYITSNLRCADENTDVKEMISYFMRMKDINPNFFYAVDMAEANKFKSAFWVDARCKTSYEYYGDVVSFDITYNRNMHRLLFASFVGVNHHGKSTLLGCALLAIIMDQCKSMFVAIRNVLPDIRHQWCIWHILKKIPHKFGGYAWYREIEARMHGTVWNARSMESFEKDWSAIILYCDLIFFFYSRFTFMTIVEYGFQSIFKVNFGLVVHEYDNVLGNKEQKELEDDYADFKGVFPCSSSSTIESQFQHEYTTYKFKEVQQEFRKRMDCLVRGVTQEGDLFRVTMNE* 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g3010 520 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 64 336 - -
Ahy5g3010 520 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 337 412 - -
Ahy5g3010 520 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 64 336 IPR031052 GO:0006355
Ahy5g3010 520 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 337 412 IPR031052 GO:0006355
Ahy5g3010 520 Pfam MULE transposase domain 336 368 IPR018289 -
Ahy5g3010 520 Pfam FAR1 DNA-binding domain 88 177 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g3010 Ahy-Chr5 111398153 111400582 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy5g3010 FAR1 9.00E-14 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g3010 - - ahf:112803995 1076.23