Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g2953 ATGGCAGGAGCATCATGGTTGGTGGACAAAAGCAGAATTGCAACCAAAATCAAGAGTGCATCAGGAGCTTGTGATCCTAACGAAGTTATTTGGAAAACCAATCCTACCAGGATTTGCCCGAATTGTCATCATCCTATTGACAATAGTGATGTAACTCAAGAGTGGCCTGGCTTACCAAAAGGGGTTAAATTTGATCCGTCAGATCAAGAGATAATCTGGCACTTGCTTGTAAAGGCTGGTGTAGGAAATTTAAAACCTCATCCTTTCATTGATGAGTTTATTACTACCCTTGAAGTGGATGATGGGATTTGTTATACTCATCCTCAACATTTACCTGGTGTCAAGCAAGACGGAAGGGCCTCACATTTCTTCCACAGAGCAATAAAGGCTTATAATACCGGTACTCGAAAGCGTCGAAAAGTACATGGTCAGGATGACGTTCGTTGGCACAAGACTGGAAGGACTAAACTGATCACCCTGAACGGGGTTCCAAAGGGTTGCAAAAAAATCATGGTTTTGTATACAAATGCGGTGAGAGGAGGAAAGTCAGAGAAAACTAATTGGGTTATGCACCAATATCACCTTGGGACAGAAGAAGATGAAAAGGAAGGAGAATATGTTATTTCTAAAGTGTTTTATAAAGAAGACCAGGATATACCTGAAGCCGCAGAAAGTAAAAATGCAACAGTTGCGAAAGTAGATCCAGTCACTCCCAAATCCACGACTCCTGAACCTCCTCGTAATGAAAGGCAAGATTCAGATCTAGGCCTGGATCTAGACCTAGGGCAAGAAGCACTTGTTTTTACTGAGATGGATTGCTTAGATGAAATTCAAGCTGACTGTGAAGAATCTGCGAAAGCTAATCCACCAGTACTGGAGACACAAGAAAATGAAGGGATGGACAACAAGGAAACTAATGCTTATGAAGCACAACCGTGGTGGGATAGTGATTCACAGAATCTATTAGATTCACAACAACTCGTTGAAGCATTAACTCTCTGCGAAGATATATTTCACAGCCAATCTTCCAACAAAGACGATGAAAATGATAAGAACCAAACCGGTCTATCTGTGTATGCTCATCTAGGACCAGAGCATCTGAAGAAGGATATTGAGGAGTGTCAAAAGCTTGCTCCTGCAGGACCAGAGCATCAGAAGGATATTGAAGACGGCCAAAATCTTGACATCGACCTTGCAAATATAGAGCGGGATACTCCTCCTGAGCATCGACTAAGTCAGCTGGAATTTGGTTCGCAGGACAGCTATACTTACTGGGGTTTTCAAGGCGTAAACTAA 1296 0.4228 MAGASWLVDKSRIATKIKSASGACDPNEVIWKTNPTRICPNCHHPIDNSDVTQEWPGLPKGVKFDPSDQEIIWHLLVKAGVGNLKPHPFIDEFITTLEVDDGICYTHPQHLPGVKQDGRASHFFHRAIKAYNTGTRKRRKVHGQDDVRWHKTGRTKLITLNGVPKGCKKIMVLYTNAVRGGKSEKTNWVMHQYHLGTEEDEKEGEYVISKVFYKEDQDIPEAAESKNATVAKVDPVTPKSTTPEPPRNERQDSDLGLDLDLGQEALVFTEMDCLDEIQADCEESAKANPPVLETQENEGMDNKETNAYEAQPWWDSDSQNLLDSQQLVEALTLCEDIFHSQSSNKDDENDKNQTGLSVYAHLGPEHLKKDIEECQKLAPAGPEHQKDIEDGQNLDIDLANIERDTPPEHRLSQLEFGSQDSYTYWGFQGVN* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g2953 431 MobiDBLite consensus disorder prediction 222 256 - -
Ahy5g2953 431 ProSiteProfiles NAC domain profile. 58 214 IPR003441 GO:0003677|GO:0006355
Ahy5g2953 431 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 2 426 IPR044799 GO:0003700
Ahy5g2953 431 PANTHER SUPPRESSOR OF GAMMA RESPONSE 1 2 426 - -
Ahy5g2953 431 SUPERFAMILY NAC domain 43 214 IPR036093 GO:0003677|GO:0006355
Ahy5g2953 431 Pfam No apical meristem (NAM) protein 59 195 IPR003441 GO:0003677|GO:0006355
Ahy5g2953 431 MobiDBLite consensus disorder prediction 379 407 - -
Ahy5g2953 431 Gene3D NAC domain 67 219 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g2953 Ahy-Chr5 109971536 109975937 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g2953 14 214 NAC Transcription Factor Family AT1G28470 52.830 6.32e-69 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Ahy5g2953 NAM 8.20E-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g2953 - - adu:107491284 892.108