Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g2948 ATGGAGGTATCGGATAGCAATTTTTTTAAAACACACTCCGATGAGGAGTTTTCAAGAAGAGACGATCTAGAGTTTTTAGAGGGAGATTCGGAGATTGATAAAGATAGACCTCAAGATAAGAGAATAACAAAACTGTCACGAGAAGACATCATGCAACTTGAGTTTACAAATAAAGATGTTTATCAATTCTATAAGACTAATGCAATGATGCACGGTTTTGCTGCGAGGTTGGATGAAGTCAGACGTAATAGCGATGATTGCGTAATTATGTGCCAAATTGTTTGCAATCGGACGGGCTCAAGAAAAGAAGAGGTTGAAAAGGACGAAAGAATCAGGGACCACCGACTCCTAACTCGAAGTTGTTGCCGTGCGAGAATTTGTGCAAGACTAGGTAGAAAAATTCATAAATGGAAGGTTGTTTCGTTCAACGAAGAGCACTCTCATGAATTAGTTGATCCACTCGACGTTAACATGATGCCTGAGTATTGCACATTCAGTGTCTCAAATAAAGCTCAGGCAAAGATTTTGCACGACATAGGCATCAGGACCTGTCATATCTTGGGATACTTGGCTGCTCAAAAAGGTGGATATGCAAACTTCAAGTACACATTAAGTAATGAGAATCGATTGGAAAACTCGTTTTGGCCTGATGGAATTAGCCGTATTGATTATGAGTGCTTTGGGGATGTCTTGACATTTGATTCAACTTACAATAAAAACGTCTACAATAATCCACTTGTGATATTTTCTAGTAGCAATCATCATGGGCATACCGTCATATTTGGATATGGTCTTCTTGTTAACGAGGATATTAGTTTATACAAATGGATCTTGAAAACTTTTTTGGAAGCAATGGGTAATAAACACCCTATGGCAGTTGTCACTGACAGAGATCTTTCAATGAGAGAAGCCATTAAACAAGTCTTTCCTTATGCAACACATCGACTATGTGCATGGCACTTACATAGAAATGCATGCGAGAAGGTTAAGAATAGTGAATTTCTAAATGACTTCAAGAAATTAATTTATGCTAATGTGAGTGTTGAACAGTTTGAGGTCGTATGGGGAGACATGGTGGCGAGGAATAATGAAAGAGTTGCAGAGTTCAATAGTAAATATACCGATTCAGTGCTTGTGACTTCTTTGCTGACACTTGAAGGTTTTGGTGCAAAGACTTTTACTCGTAACATGTTCTGGGAGGTCAAGAAGGAAATTGAGGGTGCTTGTGCTTTGAATAGAGTTGGTAATTCAGAATGA 1257 0.385 MEVSDSNFFKTHSDEEFSRRDDLEFLEGDSEIDKDRPQDKRITKLSREDIMQLEFTNKDVYQFYKTNAMMHGFAARLDEVRRNSDDCVIMCQIVCNRTGSRKEEVEKDERIRDHRLLTRSCCRARICARLGRKIHKWKVVSFNEEHSHELVDPLDVNMMPEYCTFSVSNKAQAKILHDIGIRTCHILGYLAAQKGGYANFKYTLSNENRLENSFWPDGISRIDYECFGDVLTFDSTYNKNVYNNPLVIFSSSNHHGHTVIFGYGLLVNEDISLYKWILKTFLEAMGNKHPMAVVTDRDLSMREAIKQVFPYATHRLCAWHLHRNACEKVKNSEFLNDFKKLIYANVSVEQFEVVWGDMVARNNERVAEFNSKYTDSVLVTSLLTLEGFGAKTFTRNMFWEVKKEIEGACALNRVGNSE* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g2948 418 Pfam FAR1 DNA-binding domain 62 151 IPR004330 -
Ahy5g2948 418 PANTHER OS02G0262500 PROTEIN 50 197 - -
Ahy5g2948 418 PANTHER OS02G0262500 PROTEIN 200 362 - -
Ahy5g2948 418 Pfam MULE transposase domain 230 324 IPR018289 -
Ahy5g2948 418 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 50 197 IPR031052 GO:0006355
Ahy5g2948 418 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 200 362 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g2948 Ahy-Chr5 109805439 109807028 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy5g2948 MULE 5.00E-26 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g2948 - - ahf:112803978 853.588