Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g2936 ATGCAAAGCTTCAAGACAGCTCAAACAAGCTCCCAACTGTATTGTCATTCTCCCTTCTTGCTTCGGGGAGACAATAATACCAACCGGAACCCAACACGTTTCTCTGATCTTGGCGAGATTCAACATTCTGCACCTGTGTTTCATCATGAAGATGCTGTTGATTTAAGCTCAAGCTCAATGTTTAACATGAAGTCCAACAATGTAGCTGTTTCTGTTGCTGGCACTAACTTGCAGTATGGGACGTTGACCACGACGAACCTTGGGAGTGCAGAGGTTGGTGGTTCAAGTGGGGGTGGGTGCCTGGATACAGGGATAAACATGTACCAGCAAAAAGGGATGGCTATGCCAAACATGCCTTTAGGAAATGGTCATGTTGAGAATTGGGGTGATTCAGGCATGGCTGACAACAGCCAACAGACTGATGATACTTCCACAGATATTGACATCGATGACAGAAATCAATGCAATAGAGTTCAGCATGGGGCACCCACGGTTGTGGACTCGAAGGATGAGACAAAGATCAAAGCTGTTGACCAGAAGACTATGCGGAGGCTTGCTCAAAATCGAGAGGCAGCAAGGAAAAGTCGGTTAAGAAAAAAGGCATATGTACAGCAGCTGGAGAACAGCCGAGCCAAACTCTTACAATTGGAGCAAGAGCTTCAGCGAGCACGTCAGCAGGGTATATTTATTGCAACTAACGGGGATCATACTCATTCATCTCTTGGAAATGGGGCCTTAGCATTTGATATGGAGTATGCCCGGTGGGTTGATGAGCAACAACATTTGCTAAATGACCTTAGATCAGCCTTAAATTCCCAAATGGGAGATAATGAACTGCATCTTCTTGTTGATGGTGTCATGGCACATTATGACGAATTATTTCGGTTAAAGAGCATAGGAGCAAAGGCTGATGTCTTTCACATGCTCTATGGGATGTGGAAGACACCTGCCGAAAGGTGGCTGATGTGGCTCGGCGGATTCCGGTCGTCTGAACTTCTCAAGATAGTTAAGAACCACCTCGAGCCCTTAACAGAACAGCAGTTGTTGGGGATTTGTAATCTTCAGCAGTCTTCTCATCAGGCAGAGGATGCTTTGAATCAAGGTATGGAGGCGTTGCAACAATCTCTTTCGGACACACTTTCCTCGGCCGCCCTAGGACCCACCGGTGCCGGAAATGTTGCCGATTATATGAGCCAAATGGCAATTGCAATGGGTAAGATTGCCAATCTGGAGAGTTTCCTTCATCAGGCTGATGTATTGAAGCAAGAAATGCTGCAGCAGTTGCAACGAATTTTGACCACGCGACAAATTGCACGAGCCCTCCTTGTAATGAATGATTACATTTCAAGACTAAGAGCACTCAACTCATTATGGAACTCAATGATGAGTTGCAGCGACTCTCAAGTTTAG 1410 0.4589 MQSFKTAQTSSQLYCHSPFLLRGDNNTNRNPTRFSDLGEIQHSAPVFHHEDAVDLSSSSMFNMKSNNVAVSVAGTNLQYGTLTTTNLGSAEVGGSSGGGCLDTGINMYQQKGMAMPNMPLGNGHVENWGDSGMADNSQQTDDTSTDIDIDDRNQCNRVQHGAPTVVDSKDETKIKAVDQKTMRRLAQNREAARKSRLRKKAYVQQLENSRAKLLQLEQELQRARQQGIFIATNGDHTHSSLGNGALAFDMEYARWVDEQQHLLNDLRSALNSQMGDNELHLLVDGVMAHYDELFRLKSIGAKADVFHMLYGMWKTPAERWLMWLGGFRSSELLKIVKNHLEPLTEQQLLGICNLQQSSHQAEDALNQGMEALQQSLSDTLSSAALGPTGAGNVADYMSQMAIAMGKIANLESFLHQADVLKQEMLQQLQRILTTRQIARALLVMNDYISRLRALNSLWNSMMSCSDSQV* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g2936 469 PANTHER BZIP FAMILY TRANSCRIPTION FACTOR 39 459 - -
Ahy5g2936 469 SUPERFAMILY Leucine zipper domain 180 223 IPR046347 GO:0003700|GO:0006355
Ahy5g2936 469 SMART brlzneu 176 254 IPR004827 GO:0003700|GO:0006355
Ahy5g2936 469 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 183 198 IPR004827 GO:0003700|GO:0006355
Ahy5g2936 469 ProSiteProfiles DOG1 domain profile. 245 461 IPR025422 GO:0006351|GO:0043565
Ahy5g2936 469 Coils Coil 199 226 - -
Ahy5g2936 469 CDD bZIP_HBP1b-like 180 232 - -
Ahy5g2936 469 PANTHER TRANSCRIPTION FACTOR TGA9 39 459 - -
Ahy5g2936 469 Pfam bZIP transcription factor 180 218 IPR004827 GO:0003700|GO:0006355
Ahy5g2936 469 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 178 222 IPR004827 GO:0003700|GO:0006355
Ahy5g2936 469 Pfam Seed dormancy control 263 337 IPR025422 GO:0006351|GO:0043565
Ahy5g2936 469 Gene3D - 179 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g2936 Ahy-Chr5 109518203 109524818 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g2936 3 458 bZIP Transcription Factor Family AT1G68640 55.460 2.19e-161 462
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Ahy5g2936 DOG1 1.90E-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g2936 K14431 - gmx:100797393 644.81