Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g2905 ATGTCATCACAGACAACCGCCACGGAGGCAGCGGAGCCCCAGGCGCCACTCCTCCGCTCCCGCCACGGGAACTCTGATGCCTCCGCCGCGTCTCGGGCTCCAACCCTCGCGCTTCTGCTGGGCCGAGCCACGGGCCGCCGTGGCCCGTCCATGCTGGTCCGCGAGACTGCAGCGCGGGAGCTGGAGGAGCGGCGGGCCGACTGGGGATACTCGAAGCCGGTCGTGGCGCTCGACATGTCGTGGAACATGGCCTTCGTAGTGGTCTCAGCGGTGATGCTTGCGTGCACCTTGGATGAGCGGCCGAACACGCCGATCCGCCTGTGGATCTTCGGGTACGGGCTGCAGTGCCTGCTGCACGTGGTGCTGGTGTGGCTCGAGTACCGGCGCCGGAACCAAAGGAATTCGCGGCGTCAGCGAAGGACGAGTGGCATAGAAAGCGAGGATGTTGATAGCTTTGAGGATGCCAACGATAGTGACGATGATGATGTTGGTGATGGAAACTCTTCTCCCTCCGGATTCACAAAACGATGTGAGTCGTTTAATACGGGGATTTCATTCCTTTGGTGGATAGTGGGCTTTTACTGGGTTGTCTCTGGTGGTGATATACTTCTGCAAGATGCCCCACGCTTATACTGGTTGGCTGTTGTGTTTTTGGCATTTGACGTCTTCTTTGCTATCTTTTGTGTTGTTTTGGCATGCTTAATTGGCATTGCCCTCTGTTGTTGTTTGCCTTGCATCATTGCTATTCTCTATGCTGTTGCAGGACAGGAAGGTGCGTCAGAGGCAGATCTCAGTATAATTCCAAAATACAGATTTGAAATTTTAAGCGATGAGGAAAAGCCTACTGGGGGAGCTGGAAGAATGGTTCCCATTGAAACCAGTAGTGGATATGTTGCAAACGAACGGACACTTTTGCCAGAGGATGCGGAATGTTGCATATGCCTTTGTCCTTACGAGGATGGAACAGAGCTCCATGCTCTTCCGTGCAATCATCATTTTCATTCTTTATGCATAGTGAAATGGCTAAAGATGAATGCAACTTGTCCTCTTTGCAAGTACAATATTCTCAAAGGAAATGAACAAGTGTGA 1089 0.528 MSSQTTATEAAEPQAPLLRSRHGNSDASAASRAPTLALLLGRATGRRGPSMLVRETAARELEERRADWGYSKPVVALDMSWNMAFVVVSAVMLACTLDERPNTPIRLWIFGYGLQCLLHVVLVWLEYRRRNQRNSRRQRRTSGIESEDVDSFEDANDSDDDDVGDGNSSPSGFTKRCESFNTGISFLWWIVGFYWVVSGGDILLQDAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSIIPKYRFEILSDEEKPTGGAGRMVPIETSSGYVANERTLLPEDAECCICLCPYEDGTELHALPCNHHFHSLCIVKWLKMNATCPLCKYNILKGNEQV* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g2905 362 MobiDBLite consensus disorder prediction 1 30 - -
Ahy5g2905 362 ProSiteProfiles Zinc finger RING-type profile. 311 352 IPR001841 -
Ahy5g2905 362 SMART ring_2 311 351 IPR001841 -
Ahy5g2905 362 PANTHER TARGET OF ERK KINASE MPK-1 9 362 - -
Ahy5g2905 362 MobiDBLite consensus disorder prediction 148 164 - -
Ahy5g2905 362 SUPERFAMILY RING/U-box 298 356 - -
Ahy5g2905 362 Pfam Ring finger domain 310 352 IPR001841 -
Ahy5g2905 362 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 290 360 IPR013083 -
Ahy5g2905 362 MobiDBLite consensus disorder prediction 136 171 - -
Ahy5g2905 362 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 9 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g2905 Ahy-Chr5 108890745 108903132 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g2905 3 361 C3H Transcription Factor Family AT1G68070 65.181 1.02e-172 482
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g2905 - - aip:107643865 628.246