Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g2890 ATGGAAGTGACGAGCGGTTTCGCGCTGCTCTTTCAGCAATTTAGCGCTCTCTTACGGAAGAACCTTCTGCTGTCATGGCGAAACAGGAAGGCAACGTTGCTTCAGGTTCTGTCACCACTCTTCTTCATGTTCCTCATCTTCGCCATTGACAAGGCAATTAAAGCTCAGTACTCGAACACAACTTACTACAAGAGCGTCCCTGAGCCTCCGCTTCGCCCTTCACCTTCCATCCCTCCATGCGAGAACAAGTTCTTCGTCAAACTCCCTTGCTATGATTTTGTATGGAGCGGTGATCGCAACCCTAGAATTCGGACCATTGTTGAAGCTATCATGAACAATAACCCTGGAAGGACTATACCTCCCTCTAAGGTGAAATCCTTTAGTGATAAAGCTGCAGTGGACGAGTGGCTTTTGAACAACCCTATGCACTGTCCAGGGGCTTTGCATTTTGTGGAAAGAAGTAAAACTATCATCAGCTATGGTTTACAGACAAATTCCACATATGTTCAAAAGAGAGGAAAATATGAAGACCCCACTTTTGCATTTCAACTCCCACTTCAGCTTGCTGCAGAGCGAGAAATTGCTAGGAACCTGATTGGAGACTCGAACTTCAGCTGGAATGTCTTTTTGAGGGAGTTTGCACACCCAGCCACGGCACCTTTCTCAACAGTGAGTTCCGTAGGTCCAACATTTTTCCTTGCGATTGCCATGTTCAATTTTGTGCTTCAGATGAGTTCTTTGGTTACAGAAAAAGAGCTTAAACTTCGCCAGGCAATGACTATGATGGGGCTTTATGATTCTGCTTACTGGTTGTCCTGGCTCATCTGGGAGGCATTCATTACTCTCCTGTCATCCCTTCTCGTAGTTCTGTTTGGAATGATGTTTCAGTTTCGTTTCTTCTTGAAAAACGATTTTCTGGTCGTGTTCTTTGTGTTCTTCCTATTTGAACTCAGTATGACTGGCTTAGCTTTCATGCTATCTGCTTTCATTAGTAAATCCTCTTCAGCGACAACAGTAGGCTTCTCCATATTTATTGTTGGCTTTGTGACTCAGCTTGTTATACAAGCAGGATTTCCTTATTCAGATAGCATTTCCAAGACTTTCCGAATAATTTGGTCTTTCTTTCCGCCCAATCCCTTCGCTCAAGCTCTACATATTCTTTCTGAGGCGGTCTCAACTTCTGAAGATCATGGTATTCGATGGAGTAAACGGGGACAATGCGGTCCTGAAGATGAAGGCTGTGTGATTACAATTAATGACATTTATCAATGGCTCTTAGCTACATTCGTTTTGTGGTTTGTTCTGGCCATCTACTTCGACAACATAATCCCCAATGCATCTGGTGTGAGGAAATCGATGTTATACTTTCTAAATCCGAACTATTGGATGGGAAGAGGAGGCCAAAATGTGAAAGAGGGTGGGGTTTGTAGTTGCTGCATAGTTTCAGTGCCTCGTCAAGAACATGTTACACCAGATGATCAAGATGTCCTTGAAGAACAAAATACTGTCAAAAGACAAATAACAGAAGGTGTGGTTGATGCAAATGTTGCTGTTCAGATACGTGGCCTTGCAAAGACATATCCTGGTTCTTGTAATATTGGTTGCTGCTGTAAATGTAAAAGAACTAAACCTTACAATGCCGTTAAGGATTTATGGGTGAACTTTGAAAGGGATCAACTATTTTGTCTATTAGGACCTAATGGAGCGGGTAAAACTACGGTTATTAATTGTTTGACAGGGATAACTCCAGCAACTGATGGAGATGCATTGATTTATGGACATTCCATCCGTAGCTCCACTGGCATGTCAAACATTCAAAAGCTTATAGGAGTATGTCCCCAGTTTGATATCTTGTGGGATGCACTGTCCGGCGAAGAGCATCTTCAACTCTTTGCTACTATCAAAGGCCTAACCCCAAGTTCCATCAACTCAATTACCCAAACATCACTGGCAGAGGTGAGACTCACTGATTCGGCAAAAGTGAGAGCTGGAAGTTACAGTGGAGGAATGAAACGTCGACTCAGTGTTGCAATTTCCCTTATTGGTGACCCTAAATTGGTTGTTTTGGATGAACCAACTACTGGTATGGATCCAATAACAAGGAGGCACGTATGGGACATAATTGAAAATGCTAAAAGAGGTCGTGCCATTGTCCTTACCACACACTCTATGGAAGAAGCTGACATTCTCAGTGATCGAATAGGAATCATGGCAAAGGGAAAGCTTCGCTGTATTGGCACCGCAATCAGATTGAAGTCACGCTTTGGTACTGGTTTCATTGCTAATATCAGCTTCTATGGGAACAATGTTGAAAGTCGTACAGACAATAGGGATGCTGTTTCTACGGTACATCATGAGGCTGTGAAGCAATTCTTTAAGAATCATTTAGATGTAGTGCCAAAGGAAGAGAACAACAACTTCATAACTTTTGTGATTCCTCATGACAAAGAGGGGCTCCTGACAAATTTTTTTGCGGAGCTCCAAGATAGAGAAGAAGAATTTGGCATATCTGACATTCAGCTTGGTCTGACAACTCTAGAAGAAGTTTTCCTGAATATTGCAAAGCAAGCAGAGCTAGAAAGCGCTGCAGCTGATGGGACCCTAGTGACTTTGACCTTAACATCTGGGGAGTCTGTGCAGATTCCTATAGGAGCTAGATTTGTTGGAATTCCAGAAACAGAGTCTGAAGAGTACCCAACAGGGGTTATGGTAGAAGTATACTGGGAGCAAGATGAATCTGGTGCTCTATGTATCTCTGGTCACTCACAAAAAGTTCCAGTTCCTTCTGGTGTTCGACTATCATCATCTGCTTCGGCAAGACACCGTAGAAATTCGCGCCGACCAGGATCAGTTCACGGGGTTATAATTGATCCCAGCCAAGTTAGTTCAGTCAGGTTTCAATGA 2904 0.4315 MEVTSGFALLFQQFSALLRKNLLLSWRNRKATLLQVLSPLFFMFLIFAIDKAIKAQYSNTTYYKSVPEPPLRPSPSIPPCENKFFVKLPCYDFVWSGDRNPRIRTIVEAIMNNNPGRTIPPSKVKSFSDKAAVDEWLLNNPMHCPGALHFVERSKTIISYGLQTNSTYVQKRGKYEDPTFAFQLPLQLAAEREIARNLIGDSNFSWNVFLREFAHPATAPFSTVSSVGPTFFLAIAMFNFVLQMSSLVTEKELKLRQAMTMMGLYDSAYWLSWLIWEAFITLLSSLLVVLFGMMFQFRFFLKNDFLVVFFVFFLFELSMTGLAFMLSAFISKSSSATTVGFSIFIVGFVTQLVIQAGFPYSDSISKTFRIIWSFFPPNPFAQALHILSEAVSTSEDHGIRWSKRGQCGPEDEGCVITINDIYQWLLATFVLWFVLAIYFDNIIPNASGVRKSMLYFLNPNYWMGRGGQNVKEGGVCSCCIVSVPRQEHVTPDDQDVLEEQNTVKRQITEGVVDANVAVQIRGLAKTYPGSCNIGCCCKCKRTKPYNAVKDLWVNFERDQLFCLLGPNGAGKTTVINCLTGITPATDGDALIYGHSIRSSTGMSNIQKLIGVCPQFDILWDALSGEEHLQLFATIKGLTPSSINSITQTSLAEVRLTDSAKVRAGSYSGGMKRRLSVAISLIGDPKLVVLDEPTTGMDPITRRHVWDIIENAKRGRAIVLTTHSMEEADILSDRIGIMAKGKLRCIGTAIRLKSRFGTGFIANISFYGNNVESRTDNRDAVSTVHHEAVKQFFKNHLDVVPKEENNNFITFVIPHDKEGLLTNFFAELQDREEEFGISDIQLGLTTLEEVFLNIAKQAELESAAADGTLVTLTLTSGESVQIPIGARFVGIPETESEEYPTGVMVEVYWEQDESGALCISGHSQKVPVPSGVRLSSSASARHRRNSRRPGSVHGVIIDPSQVSSVRFQ* 968
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g2890 967 ProSitePatterns ABC transporters family signature. 666 680 IPR017871 GO:0005524
Ahy5g2890 967 PANTHER ABC TRANSPORTER A FAMILY MEMBER 1-RELATED 7 934 - -
Ahy5g2890 967 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 7 934 IPR026082 GO:0016021|GO:0055085|GO:0140359
Ahy5g2890 967 MobiDBLite consensus disorder prediction 928 954 - -
Ahy5g2890 967 Pfam ABC transporter 549 693 IPR003439 GO:0005524
Ahy5g2890 967 SMART AAA_5 557 741 IPR003593 -
Ahy5g2890 967 Pfam ABC-2 family transporter protein 30 438 - -
Ahy5g2890 967 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 540 746 IPR027417 -
Ahy5g2890 967 CDD ABC_subfamily_A 518 752 - -
Ahy5g2890 967 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 518 764 IPR003439 GO:0005524
Ahy5g2890 967 Gene3D - 507 786 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g2890 Ahy-Chr5 108452786 108458882 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g2890 496 763 Calmodulin-binding Proteins AT2G36910 20.000 1.71e-08 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g2890 - - gmx:100786538 1556.96