Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g2880 ATGATGGATTGGAGGAAGTTGAGCTCATACGCGAAATCGAAGTGGATATCCACGGTGGCGAGCACATGGATTCAATGCAGCAGCGGATCACTCTACACTTTCTCAATCTATTCCCAAACCCTAAAGTCAACGCTGCACTACGATCAGTCAACTCTCACCACTGTGTCCGTCTGGAAGGACGTAGGGATCAACGCCGGTGTCCTTTGCGGCCTTCTCTACGACTTCGCTGCGCGCCGAACAGCTAACGGGCCCTGGCTGATCCACTTATTGGGCTCGGCCCAATGCTTCTTGGGCTATTTCCTCATGTGGGCAGCGGTTGCGGGCGTTATCGCGCCGGTGCCCGTGCCTGTCATGTGCCTATTCATGTACGTGACAGCCCAGGCTCAGGGCTACTTCAACACTTCCAATGTTGTCACCGGCGTCCACAACTTCCCTGACTATAGGGGAACCATTGTGGGCATCATGAAGGGATTTCTTGGTCTCAGTGGAGCAATACTAATTCAAGTGTATAGGACAATATTCAACAACAAGCCTAAAGCATATCTTCTGATGCTAGCTCTCTTGCCGCCGATAAATACTTTGCTGCTTATGTGGTTTGTAAGAATCCACAACACCCGAGAGGGCGACGAAAGGAAATATCTAAACATGTTTTCTTCCATGGCTGTGGTTGTCGCTGCATATCTAATGACTGTTATAATCCTGGAGAACATCCTTAGAGTGCCATTAATTATCCACGTGCTCATGTTGATTTTGCTCATTGTGTTGCTAGCCTCACTTCTTTGTATTGCAATTCAAGCACATGAGGCGACCCTTGCCAATATCTCTGAAAATTTTCATGATGAGAGATCCCAACTAATTGTGGAGCAAGTGTCCTCAGAATCAGATACTAACAAACAGAGGACTCTGCAACTGGGAGGAAACTTGAACCTTTTGCAAGCAGCACAAACTCTAAACTTTTGGATTTTGTTTTTGTCTGTGGCATGTGCCATGGGATCAGGACTTGCAACTATTAATAATATCAGCCAAATAGGGGAATCCCTCGGTTACACCGTGCGCGAGACAGATTCCTTGGTTTCATTGTGGAGCATTTGGAACTTCGCTGGGCGTTTCGGAGGTGGTTATATCTCGGATCACTTCTTACACACAAGAGGATGGGCAAGACCTTTGTTTATGGTCATCACCTTAATGGTCATGAGCATTGGCCATTTGATTATTGCTTCTGGATTGCAGGGTGCTCTATATGTTGGTTCAGTTTTGGTGGGTATCTGTTATGGCTCTCAGTGGTCAATAATGCCCACAATCGCTTCTGAGATATTTGGTGTGGGAAATATGGGTAGCATATATAACACCATTACAATAGCAAGTCCTGTGGGATCTTACATATTTTCAGTGAGAGTTGTTGGGTATATATATGACAAAGAAGCATCAGAGGGAAACATTTGCATTGGAACTCATTGTTTCATGTTGTCTTTCCTTATAATGGCATCTGCCACTGTTTTGGGTTCTCTGGCAGCTCTTGGTTTGTTTTTCCGGACAAGAAACTTCTATGGTCAGGTTGCACATAGAAGAATTCAGAACATCCTGTAA 1587 0.4549 MMDWRKLSSYAKSKWISTVASTWIQCSSGSLYTFSIYSQTLKSTLHYDQSTLTTVSVWKDVGINAGVLCGLLYDFAARRTANGPWLIHLLGSAQCFLGYFLMWAAVAGVIAPVPVPVMCLFMYVTAQAQGYFNTSNVVTGVHNFPDYRGTIVGIMKGFLGLSGAILIQVYRTIFNNKPKAYLLMLALLPPINTLLLMWFVRIHNTREGDERKYLNMFSSMAVVVAAYLMTVIILENILRVPLIIHVLMLILLIVLLASLLCIAIQAHEATLANISENFHDERSQLIVEQVSSESDTNKQRTLQLGGNLNLLQAAQTLNFWILFLSVACAMGSGLATINNISQIGESLGYTVRETDSLVSLWSIWNFAGRFGGGYISDHFLHTRGWARPLFMVITLMVMSIGHLIIASGLQGALYVGSVLVGICYGSQWSIMPTIASEIFGVGNMGSIYNTITIASPVGSYIFSVRVVGYIYDKEASEGNICIGTHCFMLSFLIMASATVLGSLAALGLFFRTRNFYGQVAHRRIQNIL* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g2880 528 PANTHER PROTEIN NUCLEAR FUSION DEFECTIVE 4-LIKE 11 526 - -
Ahy5g2880 528 Gene3D MFS general substrate transporter like domains 311 515 IPR036259 -
Ahy5g2880 528 Pfam Nodulin-like 14 264 IPR010658 -
Ahy5g2880 528 SUPERFAMILY MFS general substrate transporter 10 203 IPR036259 -
Ahy5g2880 528 CDD MFS_Mch1p_like 13 501 - -
Ahy5g2880 528 SUPERFAMILY MFS general substrate transporter 214 514 IPR036259 -
Ahy5g2880 528 Gene3D MFS general substrate transporter like domains 3 201 IPR036259 -
Ahy5g2880 528 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 11 526 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g2880 Ahy-Chr5 108229289 108233531 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g2880 12 526 Nodulin-like Gene Family AT1G74780 54.906 0.0 568
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g2880 - - gmx:100814668 766.918