Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g2863 ATGGTGAGGTCTCAGGGCTATGACAAAATTAGTGTCAAAAGGGGTGTTCGGAGTCCAGAAGAAGATGCAAAGATAGTTGCATTTGTGTCAAAGCATGGACCTAGTAACTGGACTTCTGTCCCAAAAAAAGCGGGGCTCAAGAGGTGTGGAAAGAGTTGCAGGTTCCGGTGGACTAATTATCTCAGACCTGATCTTAAGCAAGACACGTTTACATCCCAGGAAGAAGATCTAATCATTAAGCTTCACGCAGCCATAGGAAGCAGGTGGTTCATAATAGCCCAGCAACTCCCTGGGAGAACAGACAATGATGTGAAGAACTACTGGAACACAAAGTTGAAAAAGAAGCTCTCTCAAATGGGAATAGACCCTGTTACTCATAAGCCCTTCTCAAAGCTAATTGCTGATTATGGAAACATTGAGGGTTCTTATAGCCAAAAACCAACTAACCAAACTAGCTTTATCAACAACAAAGACTTAAAAAGTTCAATTCTCTTAAATTCAGAGCCATACCAAACCCTGAAGCCACAGGGGGTTATTTCTAGAATCACCAATAATAATAATAATAATAATAGCCAACAACAAACCCTGCAAATGGAACCAATTACTGATAAGACTAATCTTTCATTTAACTCCTTAACGGATCTTACAATGATGCCAACGGTGATAGGTTCAACAGATTGTGGCATAATGACTGAGAATGAGACCATTACTTCTTCGTCTTCTTCAAGTTGTTCCACTCCAGACCAAGACGCCTCGCCGGTGGCATCACATTTCCGTTGGAATGACTTCCTTCTAGAAGACGCCTTTGTGCCAACTGCCGATAACAATGATCAAGAAATGGTGAAGGCTGGTTTCTTGTCAAAGGAGTTACTTGTATGCCGAATTGAGAATGTGTCCCGACAAAGTTGGAACAACAAAGAAGCAAGGTCACAACATGAAGCAATAAGCAATGACTTTCAGCTCTCGTCGTCATCATCTTCCTATGAAACTTCGTTTGTAGAAGCCATGCTTGATCAAGAAAATGAGATGTTTCTGAACTTTCCTCACCTAATGGAGGAACCATCCCACTACTAA 1074 0.4143 MVRSQGYDKISVKRGVRSPEEDAKIVAFVSKHGPSNWTSVPKKAGLKRCGKSCRFRWTNYLRPDLKQDTFTSQEEDLIIKLHAAIGSRWFIIAQQLPGRTDNDVKNYWNTKLKKKLSQMGIDPVTHKPFSKLIADYGNIEGSYSQKPTNQTSFINNKDLKSSILLNSEPYQTLKPQGVISRITNNNNNNNSQQQTLQMEPITDKTNLSFNSLTDLTMMPTVIGSTDCGIMTENETITSSSSSSCSTPDQDASPVASHFRWNDFLLEDAFVPTADNNDQEMVKAGFLSKELLVCRIENVSRQSWNNKEARSQHEAISNDFQLSSSSSSYETSFVEAMLDQENEMFLNFPHLMEEPSHY* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g2863 357 Gene3D - 69 130 - -
Ahy5g2863 357 CDD SANT 69 112 IPR001005 -
Ahy5g2863 357 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Ahy5g2863 357 Gene3D - 18 66 - -
Ahy5g2863 357 PANTHER F14D16.11-RELATED 1 357 - -
Ahy5g2863 357 Pfam Myb-like DNA-binding domain 18 61 IPR001005 -
Ahy5g2863 357 Pfam Myb-like DNA-binding domain 69 110 IPR001005 -
Ahy5g2863 357 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 69 116 IPR017930 -
Ahy5g2863 357 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Ahy5g2863 357 PANTHER F14D16.11-RELATED 1 357 - -
Ahy5g2863 357 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Ahy5g2863 357 CDD SANT 18 61 IPR001005 -
Ahy5g2863 357 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Ahy5g2863 357 SMART sant 66 114 IPR001005 -
Ahy5g2863 357 SMART sant 13 63 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g2863 Ahy-Chr5 107971241 107974836 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g2863 1 353 MYB Transcription Factor Family AT3G28470 39.889 2.81e-65 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Ahy5g2863 Myb_DNA-binding 4.70E-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g2863 K09422 - gmx:100795381 335.495