Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g2861 ATGGAAGTATTCACATTCGTTCTCCGCAAATCCGGCGCCGAGTGGACTGTGAAGCAGCACTCCGGCGACATCGAGGACACCGCCTCCTCCACCTACGACCTTCAACGCAAGCTCGTCAATGCCGCTCGCGCCGCTGATTCCTCCGGCGCCGTTCAGTCCTCTTTCTCTTTCGTTTCTCCCTCCTCTGCTGTCTTCCAGGTGGTTGTGGGTGGTGCAGTCTTCGTTGGAGGTGCTGTTGCTGCTGCTCCTGCTGGTGGTGCTGCCGCAGAGAGCGCCGCCGCCCCTGCTGCCGAGAAGAAAGAAGAGAAGGTCGAGAAAGAGGAAGACGAAGATTTTGGAATGTCACTCTTTGATTAA 357 0.5714 MEVFTFVLRKSGAEWTVKQHSGDIEDTASSTYDLQRKLVNAARAADSSGAVQSSFSFVSPSSAVFQVVVGGAVFVGGAVAAAPAGGAAAESAAAPAAEKKEEKVEKEEDEDFGMSLFD* 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g2861 118 Pfam 60s Acidic ribosomal protein 47 117 - -
Ahy5g2861 118 MobiDBLite consensus disorder prediction 90 118 - -
Ahy5g2861 118 MobiDBLite consensus disorder prediction 95 110 - -
Ahy5g2861 118 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P3-1-RELATED 1 118 IPR044252 GO:0003735|GO:0005840
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g2861 Ahy-Chr5 107944224 107945193 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g2861 1 68 Cytoplasmic Ribosomal Protein Gene Family AT5G57290 69.118 3.11e-28 98.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g2861 K02942 - gmx:100527385 94.7449