Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g2794 ATGGGAGGAGGTGGCACAGAAGCTTTTCCAGATTTGGGTAAACACTGCCAGCAACCAGATTGTAAACAACTTGATTTTCTCCCTTTCACCTGTGAAGGCTGCAAGCAGGTATTCTGTTTGGAACACCGATCCTACATGTCCCATTCTTGCCCCAAGTCCGACCACAACAGCAGAAAAGTCATAATTTGTGAAACATGTTCGATTTCTATTGAGACCACAGGACATGGAGGACAGGACGAGGAGGCCATCTTGAAGAAGCACCAAAACTCAGGAACTTGTGACCCCCAAAATAAGAAGAAACCAATTTGCCCTGTAAAGCGTTGCAAGGAGGTTCTAACCTTCTCAAATTCCAGTACGTGTAAAACTTGCCACATTAAGGTGTGCCTCAAGCACCGTTTTCCCGCGGATCATGCTTGTGGTAGAGCAGCGTCGAGTCCAGTGTCAGTGTCGGTTACGGCTCCTGCTTCTGCTAGTGGGTGGTGGAATAACAAGTTCTTGGCCGCTTTCGCCTCGAGGAACGGACAAGAGTGTGGCAAGAGTGGGGGAGGTAGTTCTGCTTCAGCTCCTGGAAATCCTTCTGTTAAGGCATACTGA 594 0.4848 MGGGGTEAFPDLGKHCQQPDCKQLDFLPFTCEGCKQVFCLEHRSYMSHSCPKSDHNSRKVIICETCSISIETTGHGGQDEEAILKKHQNSGTCDPQNKKKPICPVKRCKEVLTFSNSSTCKTCHIKVCLKHRFPADHACGRAASSPVSVSVTAPASASGWWNNKFLAAFASRNGQECGKSGGGSSASAPGNPSVKAY* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g2794 197 ProSiteProfiles Zinc finger AN1-type profile. 10 58 IPR000058 GO:0008270
Ahy5g2794 197 PANTHER ARSENITE INDUCUBLE RNA ASSOCIATED PROTEIN AIP-1-RELATED 6 175 - -
Ahy5g2794 197 SUPERFAMILY AN1-like Zinc finger 9 60 IPR035896 -
Ahy5g2794 197 SUPERFAMILY AN1-like Zinc finger 95 142 IPR035896 -
Ahy5g2794 197 ProSiteProfiles Zinc finger AN1-type profile. 97 147 IPR000058 GO:0008270
Ahy5g2794 197 Pfam AN1-like Zinc finger 16 53 IPR000058 GO:0008270
Ahy5g2794 197 Pfam AN1-like Zinc finger 103 142 IPR000058 GO:0008270
Ahy5g2794 197 PANTHER AN1-TYPE ZINC FINGER PROTEIN 1 6 175 - -
Ahy5g2794 197 SMART AN1_Zf_4 103 144 IPR000058 GO:0008270
Ahy5g2794 197 SMART AN1_Zf_4 16 55 IPR000058 GO:0008270
Ahy5g2794 197 Gene3D - 2 68 IPR035896 -
Ahy5g2794 197 Gene3D - 77 156 IPR035896 -
Ahy5g2794 197 MobiDBLite consensus disorder prediction 178 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g2794 Ahy-Chr5 106683781 106685199 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g2794 1 177 C2H2 Transcription Factor Family AT3G28210 62.147 1.21e-79 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g2794 - - adu:107491409 397.127