Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g2780 ATGCATGGGTCCGGTTCTGAGGAGTGGAAACACAGCCGGCACATGTGGCCCAACGCCACTGCTGTAGCCCCCGATTCTTCACCGTCTCAATTTATATGCAAAGATGGACGCAAGATTTATGTTGGTGATTGTGCACTTTTCAAGCCACCCCGGCATTCCCCACCTTTTATTGGAATAATTCGCAAGTTAATATTTAATAAAGAAGAAAGTCCAACTTTAGAAGTTAATTGGCTTTACCGACATGCTGATGTGAAGCTTACCAAGGGCGTATTGGAAGCTGCCCCAAACGAAGTCTTCTACTCATATCACAAGAATGAAATATCTGCTTCATCATTACTCCATCCGTGTAAAGTCGCGTTCCTTCGTAAAGGTGTTGAACTTCCTTCAGGGATATCTGCGTTTGTCTGCAGGCGAGTGTATGACACTGAGAACAACTGTATATGGTGGCTAACCGATAAGGAATACATTAATGCTGTTCCGGAAGAAGTTGACCGGTTATTAGACAAGACAAAACTAGAAATGCATGGGGCAGCGCAGTCGGGAGGCCGTTCTCCAAAACCTTTGAATGGTCCGACATCAACACAATCTTTGAAATCTGGTTCTGATAGTGTTCAAAATAGTTCTTCCTTTGGTACACAGGTTAAAGGAAAAAAGAGAGAAAGGGGTGATCAGGGTTCTGATTTATCTAAACGAGAGCGACTATTTAAAGCAGAAGATGGGGATTTTGGCCCAGTTAGATCTGAGAGCATGTTGAGGAGTGAGATCAGTAAAATTACTGACAAAGGTGGGCTTGTAGACTTTGAAGGAGTTGAAAGACTTGTACAACTCATGCAACCTGATGGTGCTGATAAAAAAATAGATTTGGGTGGGAGAATAATCCTTGTTAATGCAATAGCAGCAACCGAGCGTGATGATTGTCTTAGCTGGTTTGTACAGCTCAGGGGTTTACCTGTGCTGGATGAATGGCTCCAGGAGGTTCACAAGGGAAAAAATGGTGATAGTAATACCCCTAAAGAAAGCGACAAATCAGTTGAGGAATTTTTGTTAGCCTTGCTTCGTGCATTGGATAGGCTTCCTGTGAACCTTCATGCATTGCAAACATGCAATGTTGGGAAGTCTGTTAATCATTTACGCACTCACAAAAATTCTGAAATTCAGAGGAAAGCTAGGAGTTTAGTAGATACATGGAAGAAACGTGTTGAGGCTGAAATGAATATGACCGATTCGAAATCTGGTTCTACACGTCCTGTGTCTTGGCAAGCAAAACCGGCAGCTTCTGAGATCTCTCATGTTGGAAATAAGAAAACTGGAGGATCTGAGAATGCTACAAAGGGATCTGCAATTCAATCATCAGTATCCAAAAATTCATTGGCTAAGCATGGTTCTGGGGAAGCATTGTCCAAGTCTTCTTCAGCTCCTAGCTCAATTAAATTGATGACTACCTCAATGGGCTGTACCCCTAAAGATCAGAATGTGAAGGCATTAGGTGGTGCCCCAGCATCAGATCAACCTCTGACACCTATCAAGGAGGAAAGGAGCAGCAGTTCTAGTCAGTCCCAAAACAACAGCTTATCTTGTTCTAGTGAACATGCAAAAACAATTGGGTCTTGTAGGGAAGATTCTAGGAGTTCCACTGCTGTGTCAATGAGTGCGAGCAAAATACCTGGTGGTACATCTCGAACTCGGAAGTCAAGCAATGGAGTACATGGGGCTGGTGTTGCACTTGCTCAGAAGGAGCCCATCTCGGTAAAAGGCTCTACTAGAAACTCACCTTCTGAAAAAGTTTCACCAACTCGAGTTTCCCACGAAAAATCTTTTGATCCGCCACTTACTGATCAAGGGAATAATCAACGCCTTATTCTCAGACTGCCAAATACTGCCCGTAGTCCTTCAAGGGGAGCAAGCGGTGCTGCTTCTGAAGAACCTGCTATTCCTTGTGGCATAGCTTCGCCTCCTGCCGACAAGAATGAGTCTCGGGATAGAAGAGTTAAAGGTTCAACTGGCTGTGAGCATGGTAAGGGCTCTCCGATAGCTGATGAACAGGGAAGGATTAATGAAGATGGTGATCAGGTACCAGAAACATCGAAACAGAGTAATCTGTCATCAGGATTTATTTCCAGATCAGGGCAGACATATGCTGCTTCTTTAAGCCCTATGAATGCATTAGTTGAAAGTTGTGTCAAATTCTCCGAAGCTAGTGCCTCTGTCTCTGCTGGTGATGATGGGATGAACTTACTTGCTACCGTAGCTGCAGGCGAGATATCCACATCTGGAAATGTCTCTCCTCTGGCTTCACCTGAGAGGAAGTCTCCTGTGGTAGATGAATCCAGCTCTGGCAATGTTTCCAAGTTAAAGCATCCGGGTGAAATAGCTGCTCACACTGTTACACAATCTGATAGAAGGGCATCAGCAGAGCCTCTGTTGAATGCTGTTGATCCAGTGCAATTTAAAAATGATTCAAGGCACCCTGTGACCACAATATCACGTGGTTCTGCTGGAGAAGAAGCAAATTCAACCAGTTGTAAAGAGAAAACTGGTGATAACGGGCCCCAAATGAATGTCTCTACTGCAGATTTGTCACAAAATGCTGAATCTCCTCGCATACGGCCAGAAATTGCTGAGAGTGCTTCTGAAACTGTACCACCAGCTAAAAAGGAGACTCGGGAAGAGCCTGGAGGAGAGAACCATTTTCATGTGCAGAGGGATTTTGGAAGTCAATGGGTTAAACCCAGCAGTTCAGACTCTAAAAAGGAGATGGTTGATCACTTGGATGAGGCAGTCGTGAAGAATGATGAAATGCTAGTTTCCAAAGAGACCATTGCAGGTGTAAAGATTGAAAAGGAGTTAGGTGAAAAATTACTCGAGTTATCTTCAGATGTAGGTAAGGATAACAAGATCAGTACAGAGGTTACTGGCGTATCAGTGCAAAAATCATCTGTTGCAGAAAGCAGCGAGTCTGTAGAGTTTAAAAAGGTGGATGTGACGCCGCCTTCTGCTTCTGGTAATTCTTTGATGGCATCCAGGGATGAAAATGCAAATGAGATGAAGCTGGCTGCCACCAATCCTGATGAAAAACCGATGGATCTAGAATCAACAGTTCCTGCTGATGTTAGCGGGTGTGACAAAGATAATTCAGGTCTGAAGGAGATTCTTGGTCAATGTTCTGGATCATCAAATCCCCCAGCGTTGTCCAAAGTTCCCGGGAAAGAAAATGAAGTGTCTAAAACTTCTGTGTGCAACTTAGATGGAAAGGAATCTGATGTTGCAGGTGAGCAGCATGCCCACAGTATTCATCCATCCCTCACTGTTGCTGGGTCTGATGCAGGTGTAATATTAGACTTCGATCTAAATGAGGGCTTCGCTGTTGATGATGCTAGCCATGGGGAGATTGTTCGGCAGGAAGAACACACCACATCATCTGCGGTCCATAATCCTTGTGCATTGCCTTTTCCCATTTCATCCATCTCTGGGGGATTCCATACAACAATTACAGTGGCATCTGCTGTCAAGGGGCGAGTTGTTCTACCAGAAAACCCATTGCGCAGTAAGGGTGAACTTGGATGGAAAGGCTCTGCTGCAACAAGTGCCTTCCGGCCAGCTGAACCTAGGAAAAATTCAGAGACACCGTCAACTACTGGAGATATTCCTTCTGTTGATTCCACATCTTCAAAACAAGGCCGTGCTCCTTTAGATTTTGATTTGAATGTTGCTGATGAAAGAAGTTTTGAGGATGTAGGTTCCCATGGTTCTTCAGAATCTGGGCCACCTGATCGCAGCACGATGGGACTTGATCTTGATTTGAACAGAGTTGATGAGACTCCTGATGCTGTTTCTTACTCTATGAGTAAACTGGATGCTCCTACATTGCCAAGTAAGTCTTCACTGTCTGGTAGGTTATCTAATGGTGGAAGTGTGTCAAGAGACTTCGATTTGAATAATGGACCAGGCCTTGATGAAGTTGGCACAGAGGTCCCAACTCGAATTCAGCAGATGAAAAATAGTGCACCGATTCCATCTGCCATCCATGGTACAAGAGCCAACAATGCTGAATATGGGAATTATTCATCATGGTTTCCCCCAGGAAATTCTTATTCTGCAATTACTGTCCCTCCACTTCTTCCTGGTAGAGGTGAACAGAGTTATGTTGCAGCTGCTGGAGCACAGCGGATAATGGGTCCCACTGGTAGTGCAGCGTTTGGTCCTGAACTCTACCGGGGGCCAGTGCTTTCATCTGCTCCTGCTGTTGCTTACCAACCTACTGCAGCACCCTTTCCATATCCAGGAGGATTTCCATTTGAAACTAGTTTTCCATTATCTTCAAACTCCTTTTCTGTTGGTTCAGCAACATTTATTGATTCATCAACAGTTGGTGGACTTTGCTTTCCTACTATGCCGTCGCAGCCAGTTGCACCTGGTGGTGTTGTCTCCTCAACATATCCGCGTCCATATGTCATGAGTCTTCCTGGGGGTACAAGTAATGTGATTCCTGACACCCGAAAATGGGGAAGTCAAAGTCTGGATCTTAATTCAGGCCCCGGTGGTACAGATACAGACAGGAGAGAGGAACATATGAAGATGTTTCAGGTGGCAGGTGTCTTGAAGAGAAAAGAACCTGATGGTGGTTGGGATGGAGCTGATAGATTCAGCTACAAACAGCCCTCATGGCAGTAG 4671 0.4474 MHGSGSEEWKHSRHMWPNATAVAPDSSPSQFICKDGRKIYVGDCALFKPPRHSPPFIGIIRKLIFNKEESPTLEVNWLYRHADVKLTKGVLEAAPNEVFYSYHKNEISASSLLHPCKVAFLRKGVELPSGISAFVCRRVYDTENNCIWWLTDKEYINAVPEEVDRLLDKTKLEMHGAAQSGGRSPKPLNGPTSTQSLKSGSDSVQNSSSFGTQVKGKKRERGDQGSDLSKRERLFKAEDGDFGPVRSESMLRSEISKITDKGGLVDFEGVERLVQLMQPDGADKKIDLGGRIILVNAIAATERDDCLSWFVQLRGLPVLDEWLQEVHKGKNGDSNTPKESDKSVEEFLLALLRALDRLPVNLHALQTCNVGKSVNHLRTHKNSEIQRKARSLVDTWKKRVEAEMNMTDSKSGSTRPVSWQAKPAASEISHVGNKKTGGSENATKGSAIQSSVSKNSLAKHGSGEALSKSSSAPSSIKLMTTSMGCTPKDQNVKALGGAPASDQPLTPIKEERSSSSSQSQNNSLSCSSEHAKTIGSCREDSRSSTAVSMSASKIPGGTSRTRKSSNGVHGAGVALAQKEPISVKGSTRNSPSEKVSPTRVSHEKSFDPPLTDQGNNQRLILRLPNTARSPSRGASGAASEEPAIPCGIASPPADKNESRDRRVKGSTGCEHGKGSPIADEQGRINEDGDQVPETSKQSNLSSGFISRSGQTYAASLSPMNALVESCVKFSEASASVSAGDDGMNLLATVAAGEISTSGNVSPLASPERKSPVVDESSSGNVSKLKHPGEIAAHTVTQSDRRASAEPLLNAVDPVQFKNDSRHPVTTISRGSAGEEANSTSCKEKTGDNGPQMNVSTADLSQNAESPRIRPEIAESASETVPPAKKETREEPGGENHFHVQRDFGSQWVKPSSSDSKKEMVDHLDEAVVKNDEMLVSKETIAGVKIEKELGEKLLELSSDVGKDNKISTEVTGVSVQKSSVAESSESVEFKKVDVTPPSASGNSLMASRDENANEMKLAATNPDEKPMDLESTVPADVSGCDKDNSGLKEILGQCSGSSNPPALSKVPGKENEVSKTSVCNLDGKESDVAGEQHAHSIHPSLTVAGSDAGVILDFDLNEGFAVDDASHGEIVRQEEHTTSSAVHNPCALPFPISSISGGFHTTITVASAVKGRVVLPENPLRSKGELGWKGSAATSAFRPAEPRKNSETPSTTGDIPSVDSTSSKQGRAPLDFDLNVADERSFEDVGSHGSSESGPPDRSTMGLDLDLNRVDETPDAVSYSMSKLDAPTLPSKSSLSGRLSNGGSVSRDFDLNNGPGLDEVGTEVPTRIQQMKNSAPIPSAIHGTRANNAEYGNYSSWFPPGNSYSAITVPPLLPGRGEQSYVAAAGAQRIMGPTGSAAFGPELYRGPVLSSAPAVAYQPTAAPFPYPGGFPFETSFPLSSNSFSVGSATFIDSSTVGGLCFPTMPSQPVAPGGVVSSTYPRPYVMSLPGGTSNVIPDTRKWGSQSLDLNSGPGGTDTDRREEHMKMFQVAGVLKRKEPDGGWDGADRFSYKQPSWQ* 1557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g2780 1556 MobiDBLite consensus disorder prediction 676 690 - -
Ahy5g2780 1556 PANTHER BAH DOMAIN-CONTAINING PROTEIN 1 1556 - -
Ahy5g2780 1556 MobiDBLite consensus disorder prediction 404 704 - -
Ahy5g2780 1556 MobiDBLite consensus disorder prediction 1241 1264 - -
Ahy5g2780 1556 MobiDBLite consensus disorder prediction 960 1029 - -
Ahy5g2780 1556 MobiDBLite consensus disorder prediction 1535 1556 - -
Ahy5g2780 1556 SMART TFS2_5 323 402 IPR003617 GO:0005634
Ahy5g2780 1556 MobiDBLite consensus disorder prediction 654 668 - -
Ahy5g2780 1556 Gene3D - 21 235 IPR043151 -
Ahy5g2780 1556 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 270 404 IPR035441 -
Ahy5g2780 1556 MobiDBLite consensus disorder prediction 582 596 - -
Ahy5g2780 1556 MobiDBLite consensus disorder prediction 608 633 - -
Ahy5g2780 1556 Pfam BAH domain 38 144 IPR001025 GO:0003682
Ahy5g2780 1556 PANTHER BAH AND TFIIS DOMAIN-CONTAINING PROTEIN-RELATED 1 1556 - -
Ahy5g2780 1556 MobiDBLite consensus disorder prediction 819 863 - -
Ahy5g2780 1556 MobiDBLite consensus disorder prediction 1498 1512 - -
Ahy5g2780 1556 MobiDBLite consensus disorder prediction 1204 1228 - -
Ahy5g2780 1556 MobiDBLite consensus disorder prediction 1051 1073 - -
Ahy5g2780 1556 CDD TFIIS_I 359 401 - -
Ahy5g2780 1556 MobiDBLite consensus disorder prediction 174 233 - -
Ahy5g2780 1556 MobiDBLite consensus disorder prediction 1284 1308 - -
Ahy5g2780 1556 MobiDBLite consensus disorder prediction 1498 1520 - -
Ahy5g2780 1556 MobiDBLite consensus disorder prediction 214 233 - -
Ahy5g2780 1556 MobiDBLite consensus disorder prediction 1180 1229 - -
Ahy5g2780 1556 MobiDBLite consensus disorder prediction 185 213 - -
Ahy5g2780 1556 MobiDBLite consensus disorder prediction 507 566 - -
Ahy5g2780 1556 ProSiteProfiles TFIIS N-terminal domain profile. 324 403 IPR017923 -
Ahy5g2780 1556 MobiDBLite consensus disorder prediction 406 420 - -
Ahy5g2780 1556 MobiDBLite consensus disorder prediction 1276 1321 - -
Ahy5g2780 1556 ProSiteProfiles BAH domain profile. 37 151 IPR001025 GO:0003682
Ahy5g2780 1556 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 306 413 IPR035441 -
Ahy5g2780 1556 Pfam TFIIS helical bundle-like domain 351 400 IPR017923 -
Ahy5g2780 1556 SMART BAH_4 37 151 IPR001025 GO:0003682
Ahy5g2780 1556 MobiDBLite consensus disorder prediction 961 983 - -
Ahy5g2780 1556 MobiDBLite consensus disorder prediction 432 488 - -
Ahy5g2780 1556 MobiDBLite consensus disorder prediction 881 897 - -
Ahy5g2780 1556 MobiDBLite consensus disorder prediction 756 919 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g2780 Ahy-Chr5 106384344 106392942 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Ahy5g2780 BAH 6.80E-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g2780 - - ahf:112750750 2329.67