Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g2777 ATGTCGCAACAAGAATACGGTTACGCCATCGAACTCTACTTGGACCCGGCGCTGGAGAACCAGGTCCTGAAAGCATGGAACGCCCTCGCCCGCCGCCAAATCAGCACTCACCTCATCGACATGGCCTCTCGCCCTCACATCACTCTCTTCTCTTTCCCTTCTTCCTCCCTCGACCCTTCCAAATTCGACTCCATCCTCGAACCCTTCGCTTCAAAGCAAGAGCCTCTTCCCCTCTCCTTCTCCTCCATCGGCTCTCTCTCCGGCGACTCCAACCTCCTCTTTCTCTCTCCCACTCCCACGCTTTCCCTCTTGCAGCTCCACTCTCAGCTCTCCGATGCCTTGAGGAAAGAAGGCGTTGAGGTTCCCGCTGACTATTCCGTTGACAATTGGATCCCTCATTGCTCCGTTGCCAAGCACGTTCCCAAGCCCAGAATGGCCGAAGGATTCTCTGTTTTGAGGGATTTGAAGCTTCCTGTTACTGGCTATGCTGTTGACATTGCCCTCGTCGAGTTTTCGCCCGTTCGCGAGCTCTTCTCCTTTGTTCTTGGCACTGCTCTTGGATCTTGA 567 0.5467 MSQQEYGYAIELYLDPALENQVLKAWNALARRQISTHLIDMASRPHITLFSFPSSSLDPSKFDSILEPFASKQEPLPLSFSSIGSLSGDSNLLFLSPTPTLSLLQLHSQLSDALRKEGVEVPADYSVDNWIPHCSVAKHVPKPRMAEGFSVLRDLKLPVTGYAVDIALVEFSPVRELFSFVLGTALGS* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g2777 188 SUPERFAMILY LigT-like 6 139 IPR009097 -
Ahy5g2777 188 Pfam 2'-5' RNA ligase superfamily 43 169 - -
Ahy5g2777 188 Gene3D Cyclic phosphodiesterase 7 183 - -
Ahy5g2777 188 PANTHER - 3 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g2777 Ahy-Chr5 106351748 106354465 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g2777 7 188 Calmodulin-binding Proteins AT5G40190 66.484 2.91e-79 232
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g2777 - - mnt:21391761 229.95