Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ahy5g2757 | ATGATCATGGAACTCACAGATTCCGGTTCCGCCGGCGACCGCACCACCGCTCCGCAGCCTCAAGACTCCCGCTCCTCCGGCCTTGAAATCGACCTCAACGAGATCCCTTACGCCGCAGCTTCACCTTCTTCCAACCACGCCGAAACCCTACCGCCGCCACCGGACTCCGCCGTCGACATCGTCCGCGCCTATCACGAGAACCCCGCGCCGCTACCAGGAGCTCCCGCCTCGCTACCCCGCGGCTCTGCTCCCTGTGCCACATGCTCTAAGCCGCCTGGTGCCGCCGGTGTTGTCGTCTGCGACGGCTGTGAGCGCGTGTTCCACATCGCATGTGCTGGGTTTCGCGGGACCCGCCAGGCGGCGATCCTTGATGAGTGGCTCTGCAGTGAGTGTGTCGTCGGCGGAGTGAGGAGCAAGAGGTGGCCGCTCGGCGTCAAGTCCAAGCAGCTCCTGGATATCAATGCCTCGCCGCCCAGTGATGCTGACGGAGAAGGTGCTTGCGAGGAGTTACAGGATTCGAGAAAGCACACTCTGGGTGATAATTCTTTTGGTGCCAATCCATTTGGTGCCCCAGTGACATGTTCAAACTACTACAATGGGAACACTTTTGGCTTCCAAAAGGCATCGGGAGTTGTAACACATGCTGTTAGAGTGGGTTTTGAGGATATACTGAATCATACCCAATCAATGACTAGATGCTTTGAGGAGGCTCTTAGAGACTTCATATCTGAAAGGCGTGGTGTGCTAGAGGAAGGTTGGCGAGTGGAATTTAGGCAATCCATGAACAGTTCTGAACTGTATGCAGTTTACTGTGCTCCTGATGGGAAAATTTTTGATTCTGTGTATGAAGTAGCTTGTTATTTGGGGCTAACATCTGGCTACAACTCTATGGAATCCGAAGTTAGAAATGATAGGTCTCTTGCTTCATTAGGTGGAACTCATCTATCCAGAAAAAGAAAGTCAACAAGGAATCTATCCAATGGTTTTGCAGAAAAATTAGGAACCTTGATCAATAGTTACTGTAGGGATTCTCCATCAGATGCTTTAACTGTGGAATGTACTGGTGATCATGGGCATGTCCACAAAGCCTCAGAAATTGCAAGAAAAGAGGATTGTCATTCAGGTTGTCTGCAATCTGCCGATAGACTTCCTCTACGGTTCGGCGATTTTTTTGTTCTTTCTTTGGGAAAAGTTGATGATAGACCTACATATTTTGATGTTCACCTTGTCTGTCCCATAGGTTATAAATCTTGTTGGCATGATAAGATTACTGGTTCTCTTTTTACATGTGAAGTTTTAGAGGGTGGTGATTCTGGACCTATATTTAGGATAAAAAGGTGCTCTTGTTCTGAGTTTCCTGTTCCAGTTGGGTCAACTGTCCTATCAATGTCAAATCTCTGTCAGTTTTTGAATAAAAATAATGGTGAGAGAAAGACTGATGATAGCATGGATTACGATGTTCATGAAAGTATCCAGATGATTCTTTCAGATCCTTGTGTGCCAACGGAAAATGATGTCATTAATTGTATTGCAAGTTTCTCAAATGAAACATGTGCTGGAGATTCAATATCCCAAGACTCAGGATTGATTGATGGAATTGGTGAAATTTTGGTGGAAGAGAGGTCATCATCTGCGGCTTGGAGAGTTATTTCTCAGAAGGTAGTAAATGCTTGCAATGATATCTGCAAGCAGAAAGGAAGCCTTAAGTTCTATTGTAAACATATTGAAGATGAACCGTGCTTACACAAATGGGACACAAATAGAAAAAAAGTGATGCACACTTTTCTTTGTTGGATAAATTTTGTGGTTCACTATGTTCAGTTAGCGTTCCGGATGTAA | 1839 | 0.4622 | MIMELTDSGSAGDRTTAPQPQDSRSSGLEIDLNEIPYAAASPSSNHAETLPPPPDSAVDIVRAYHENPAPLPGAPASLPRGSAPCATCSKPPGAAGVVVCDGCERVFHIACAGFRGTRQAAILDEWLCSECVVGGVRSKRWPLGVKSKQLLDINASPPSDADGEGACEELQDSRKHTLGDNSFGANPFGAPVTCSNYYNGNTFGFQKASGVVTHAVRVGFEDILNHTQSMTRCFEEALRDFISERRGVLEEGWRVEFRQSMNSSELYAVYCAPDGKIFDSVYEVACYLGLTSGYNSMESEVRNDRSLASLGGTHLSRKRKSTRNLSNGFAEKLGTLINSYCRDSPSDALTVECTGDHGHVHKASEIARKEDCHSGCLQSADRLPLRFGDFFVLSLGKVDDRPTYFDVHLVCPIGYKSCWHDKITGSLFTCEVLEGGDSGPIFRIKRCSCSEFPVPVGSTVLSMSNLCQFLNKNNGERKTDDSMDYDVHESIQMILSDPCVPTENDVINCIASFSNETCAGDSISQDSGLIDGIGEILVEERSSSAAWRVISQKVVNACNDICKQKGSLKFYCKHIEDEPCLHKWDTNRKKVMHTFLCWINFVVHYVQLAFRM* | 613 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ahy5g2757 | 612 | PANTHER | METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 9 | 24 | 593 | - | - | |
Ahy5g2757 | 612 | MobiDBLite | consensus disorder prediction | 9 | 28 | - | - | |
Ahy5g2757 | 612 | CDD | PHD_TCF19_like | 84 | 131 | - | - | |
Ahy5g2757 | 612 | Pfam | PHD-finger | 85 | 132 | IPR019787 | - | |
Ahy5g2757 | 612 | Gene3D | - | 383 | 493 | - | - | |
Ahy5g2757 | 612 | ProSiteProfiles | FYR domain FYRN motif profile. | 382 | 435 | IPR003888 | GO:0005634 | |
Ahy5g2757 | 612 | SMART | PHD_3 | 84 | 132 | IPR001965 | - | |
Ahy5g2757 | 612 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 76 | 138 | IPR013083 | - | |
Ahy5g2757 | 612 | Pfam | Methyl-CpG binding domain | 240 | 293 | IPR001739 | GO:0003677 | |
Ahy5g2757 | 612 | SUPERFAMILY | DNA-binding domain | 241 | 293 | IPR016177 | GO:0003677 | |
Ahy5g2757 | 612 | Gene3D | - | 244 | 300 | - | - | |
Ahy5g2757 | 612 | ProSiteProfiles | Methyl-CpG-binding domain (MBD) profile. | 239 | 306 | IPR001739 | GO:0003677 | |
Ahy5g2757 | 612 | ProSitePatterns | Zinc finger PHD-type signature. | 85 | 131 | IPR019786 | - | |
Ahy5g2757 | 612 | MobiDBLite | consensus disorder prediction | 1 | 34 | - | - | |
Ahy5g2757 | 612 | SUPERFAMILY | FYVE/PHD zinc finger | 51 | 132 | IPR011011 | - | |
Ahy5g2757 | 612 | ProSiteProfiles | Zinc finger PHD-type profile. | 82 | 134 | IPR019787 | - | |
Ahy5g2757 | 612 | PANTHER | OS02G0192300 PROTEIN | 24 | 593 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ahy5g2757 | Ahy-Chr5 | 105924936 | 105929379 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ahy5g2757 | 3 | 590 | C2H2 Transcription Factor Family | AT3G01460 | 41.640 | 2.42e-133 | 429 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | PHD | Ahy5g2757 | MBD | 4.60E-11 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ahy5g2757 | K22768 | - | ahf:112802482 | 1264.21 |