Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g2757 ATGATCATGGAACTCACAGATTCCGGTTCCGCCGGCGACCGCACCACCGCTCCGCAGCCTCAAGACTCCCGCTCCTCCGGCCTTGAAATCGACCTCAACGAGATCCCTTACGCCGCAGCTTCACCTTCTTCCAACCACGCCGAAACCCTACCGCCGCCACCGGACTCCGCCGTCGACATCGTCCGCGCCTATCACGAGAACCCCGCGCCGCTACCAGGAGCTCCCGCCTCGCTACCCCGCGGCTCTGCTCCCTGTGCCACATGCTCTAAGCCGCCTGGTGCCGCCGGTGTTGTCGTCTGCGACGGCTGTGAGCGCGTGTTCCACATCGCATGTGCTGGGTTTCGCGGGACCCGCCAGGCGGCGATCCTTGATGAGTGGCTCTGCAGTGAGTGTGTCGTCGGCGGAGTGAGGAGCAAGAGGTGGCCGCTCGGCGTCAAGTCCAAGCAGCTCCTGGATATCAATGCCTCGCCGCCCAGTGATGCTGACGGAGAAGGTGCTTGCGAGGAGTTACAGGATTCGAGAAAGCACACTCTGGGTGATAATTCTTTTGGTGCCAATCCATTTGGTGCCCCAGTGACATGTTCAAACTACTACAATGGGAACACTTTTGGCTTCCAAAAGGCATCGGGAGTTGTAACACATGCTGTTAGAGTGGGTTTTGAGGATATACTGAATCATACCCAATCAATGACTAGATGCTTTGAGGAGGCTCTTAGAGACTTCATATCTGAAAGGCGTGGTGTGCTAGAGGAAGGTTGGCGAGTGGAATTTAGGCAATCCATGAACAGTTCTGAACTGTATGCAGTTTACTGTGCTCCTGATGGGAAAATTTTTGATTCTGTGTATGAAGTAGCTTGTTATTTGGGGCTAACATCTGGCTACAACTCTATGGAATCCGAAGTTAGAAATGATAGGTCTCTTGCTTCATTAGGTGGAACTCATCTATCCAGAAAAAGAAAGTCAACAAGGAATCTATCCAATGGTTTTGCAGAAAAATTAGGAACCTTGATCAATAGTTACTGTAGGGATTCTCCATCAGATGCTTTAACTGTGGAATGTACTGGTGATCATGGGCATGTCCACAAAGCCTCAGAAATTGCAAGAAAAGAGGATTGTCATTCAGGTTGTCTGCAATCTGCCGATAGACTTCCTCTACGGTTCGGCGATTTTTTTGTTCTTTCTTTGGGAAAAGTTGATGATAGACCTACATATTTTGATGTTCACCTTGTCTGTCCCATAGGTTATAAATCTTGTTGGCATGATAAGATTACTGGTTCTCTTTTTACATGTGAAGTTTTAGAGGGTGGTGATTCTGGACCTATATTTAGGATAAAAAGGTGCTCTTGTTCTGAGTTTCCTGTTCCAGTTGGGTCAACTGTCCTATCAATGTCAAATCTCTGTCAGTTTTTGAATAAAAATAATGGTGAGAGAAAGACTGATGATAGCATGGATTACGATGTTCATGAAAGTATCCAGATGATTCTTTCAGATCCTTGTGTGCCAACGGAAAATGATGTCATTAATTGTATTGCAAGTTTCTCAAATGAAACATGTGCTGGAGATTCAATATCCCAAGACTCAGGATTGATTGATGGAATTGGTGAAATTTTGGTGGAAGAGAGGTCATCATCTGCGGCTTGGAGAGTTATTTCTCAGAAGGTAGTAAATGCTTGCAATGATATCTGCAAGCAGAAAGGAAGCCTTAAGTTCTATTGTAAACATATTGAAGATGAACCGTGCTTACACAAATGGGACACAAATAGAAAAAAAGTGATGCACACTTTTCTTTGTTGGATAAATTTTGTGGTTCACTATGTTCAGTTAGCGTTCCGGATGTAA 1839 0.4622 MIMELTDSGSAGDRTTAPQPQDSRSSGLEIDLNEIPYAAASPSSNHAETLPPPPDSAVDIVRAYHENPAPLPGAPASLPRGSAPCATCSKPPGAAGVVVCDGCERVFHIACAGFRGTRQAAILDEWLCSECVVGGVRSKRWPLGVKSKQLLDINASPPSDADGEGACEELQDSRKHTLGDNSFGANPFGAPVTCSNYYNGNTFGFQKASGVVTHAVRVGFEDILNHTQSMTRCFEEALRDFISERRGVLEEGWRVEFRQSMNSSELYAVYCAPDGKIFDSVYEVACYLGLTSGYNSMESEVRNDRSLASLGGTHLSRKRKSTRNLSNGFAEKLGTLINSYCRDSPSDALTVECTGDHGHVHKASEIARKEDCHSGCLQSADRLPLRFGDFFVLSLGKVDDRPTYFDVHLVCPIGYKSCWHDKITGSLFTCEVLEGGDSGPIFRIKRCSCSEFPVPVGSTVLSMSNLCQFLNKNNGERKTDDSMDYDVHESIQMILSDPCVPTENDVINCIASFSNETCAGDSISQDSGLIDGIGEILVEERSSSAAWRVISQKVVNACNDICKQKGSLKFYCKHIEDEPCLHKWDTNRKKVMHTFLCWINFVVHYVQLAFRM* 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g2757 612 PANTHER METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 9 24 593 - -
Ahy5g2757 612 MobiDBLite consensus disorder prediction 9 28 - -
Ahy5g2757 612 CDD PHD_TCF19_like 84 131 - -
Ahy5g2757 612 Pfam PHD-finger 85 132 IPR019787 -
Ahy5g2757 612 Gene3D - 383 493 - -
Ahy5g2757 612 ProSiteProfiles FYR domain FYRN motif profile. 382 435 IPR003888 GO:0005634
Ahy5g2757 612 SMART PHD_3 84 132 IPR001965 -
Ahy5g2757 612 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 76 138 IPR013083 -
Ahy5g2757 612 Pfam Methyl-CpG binding domain 240 293 IPR001739 GO:0003677
Ahy5g2757 612 SUPERFAMILY DNA-binding domain 241 293 IPR016177 GO:0003677
Ahy5g2757 612 Gene3D - 244 300 - -
Ahy5g2757 612 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 239 306 IPR001739 GO:0003677
Ahy5g2757 612 ProSitePatterns Zinc finger PHD-type signature. 85 131 IPR019786 -
Ahy5g2757 612 MobiDBLite consensus disorder prediction 1 34 - -
Ahy5g2757 612 SUPERFAMILY FYVE/PHD zinc finger 51 132 IPR011011 -
Ahy5g2757 612 ProSiteProfiles Zinc finger PHD-type profile. 82 134 IPR019787 -
Ahy5g2757 612 PANTHER OS02G0192300 PROTEIN 24 593 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g2757 Ahy-Chr5 105924936 105929379 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g2757 3 590 C2H2 Transcription Factor Family AT3G01460 41.640 2.42e-133 429
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Ahy5g2757 MBD 4.60E-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g2757 K22768 - ahf:112802482 1264.21